Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 KRT8P10-201ENST00000450021 1447 ntBASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 MCCD1P1-208ENST00000445732 328 ntBASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 SEC1P-202ENST00000473944 940 ntBASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 MIR3180-5-201ENST00000583743 153 ntBASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 AL157888.1-201ENST00000631930 593 ntBASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 TCF3P1-201ENST00000423021 1937 ntBASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TMEFF1Q8IYR6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 PVRIG2P-201ENST00000435460 978 ntBASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 AP000347.1-202ENST00000435868 847 ntBASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 FAAHP1-202ENST00000446499 1238 ntBASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEFF1Q8IYR6 KRT18P1-202ENST00000452408 1331 ntBASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 CHCHD2P8-201ENST00000429873 447 ntBASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 KRT17P6-201ENST00000453795 1220 ntBASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 IFNL4P1-201ENST00000607083 540 ntBASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TMEFF1Q8IYR6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms