Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 MCCD1P1-208ENST00000445732 328 ntBASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRTM4Q86VH4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 AC141257.4-201ENST00000634557 245 ntBASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 AC136944.6-201ENST00000634818 245 ntBASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRTM4Q86VH4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LRRTM4Q86VH4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRTM4Q86VH4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.52■□□□□ 0.55
LRRTM4Q86VH4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LRRTM4Q86VH4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRTM4Q86VH4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRRTM4Q86VH4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 RCC2P3-201ENST00000418112 1537 ntBASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 BX664615.1-201ENST00000443558 458 ntBASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 CR769767.2-201ENST00000622735 460 ntBASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRTM4Q86VH4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRTM4Q86VH4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms