Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DENND4AQ7Z401 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 Z69720.1-201ENST00000601483 472 ntBASIC19.42■□□□□ 0.7
DENND4AQ7Z401 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.42■□□□□ 0.7
DENND4AQ7Z401 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.42■□□□□ 0.7
DENND4AQ7Z401 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.41■□□□□ 0.7
DENND4AQ7Z401 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 AP000593.1-201ENST00000393668 712 ntBASIC19.41■□□□□ 0.7
DENND4AQ7Z401 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 AC091304.2-201ENST00000564639 760 ntBASIC19.41■□□□□ 0.7
DENND4AQ7Z401 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 AL353801.3-201ENST00000609898 542 ntBASIC19.41■□□□□ 0.7
DENND4AQ7Z401 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DENND4AQ7Z401 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 IGHV3-47-201ENST00000425060 335 ntBASIC19.4■□□□□ 0.7
DENND4AQ7Z401 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 AC091607.1-201ENST00000490318 1060 ntBASIC19.4■□□□□ 0.7
DENND4AQ7Z401 AP005901.3-202ENST00000581653 237 ntBASIC19.4■□□□□ 0.7
DENND4AQ7Z401 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DENND4AQ7Z401 MIR7706-201ENST00000613747 67 ntBASIC19.4■□□□□ 0.7
DENND4AQ7Z401 AL773604.1-201ENST00000617417 272 ntBASIC19.4■□□□□ 0.7
DENND4AQ7Z401 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms