Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM88Q6PEY1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 AC123595.1-201ENST00000440769 1046 ntBASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 AL162430.1-201ENST00000480705 870 ntBASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 DPP3P2-201ENST00000416030 1696 ntBASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM88Q6PEY1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 LINC00554-201ENST00000564841 3011 ntBASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 AC034268.1-201ENST00000441047 882 ntBASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 AC022211.2-201ENST00000585075 2527 ntBASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 LINC02228-203ENST00000641970 1355 ntBASIC15.24■□□□□ 0.03
TMEM88Q6PEY1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM88Q6PEY1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM88Q6PEY1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM88Q6PEY1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM88Q6PEY1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms