Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC27.07■■□□□ 1.92
CLTCL1P53675 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CLTCL1P53675 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC27.07■■□□□ 1.92
CLTCL1P53675 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 AL732292.2-201ENST00000609649 430 ntBASIC27.07■■□□□ 1.92
CLTCL1P53675 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CLTCL1P53675 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 AC026396.1-201ENST00000419388 421 ntBASIC27.06■■□□□ 1.92
CLTCL1P53675 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC27.06■■□□□ 1.92
CLTCL1P53675 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC27.06■■□□□ 1.92
CLTCL1P53675 AC111152.3-201ENST00000569699 673 ntBASIC27.06■■□□□ 1.92
CLTCL1P53675 VPS72-207ENST00000640458 689 ntTSL 5 BASIC27.06■■□□□ 1.92
CLTCL1P53675 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC27.06■■□□□ 1.92
CLTCL1P53675 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC27.06■■□□□ 1.92
CLTCL1P53675 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 AC141586.3-201ENST00000562166 1838 ntBASIC27.06■■□□□ 1.92
CLTCL1P53675 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CLTCL1P53675 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC27.05■■□□□ 1.92
CLTCL1P53675 PVRIG2P-201ENST00000435460 978 ntBASIC27.05■■□□□ 1.92
CLTCL1P53675 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CLTCL1P53675 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27.05■■□□□ 1.92
CLTCL1P53675 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CLTCL1P53675 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CLTCL1P53675 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CLTCL1P53675 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CLTCL1P53675 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC27.05■■□□□ 1.92
CLTCL1P53675 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC27.05■■□□□ 1.92
CLTCL1P53675 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CLTCL1P53675 TSPY22P-201ENST00000427496 604 ntBASIC27.05■■□□□ 1.92
CLTCL1P53675 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC27.05■■□□□ 1.92
CLTCL1P53675 DRAXINP1-201ENST00000437611 948 ntBASIC27.05■■□□□ 1.92
CLTCL1P53675 MPI-205ENST00000562606 1052 ntTSL 3 BASIC27.05■■□□□ 1.92
CLTCL1P53675 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CLTCL1P53675 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC27.04■■□□□ 1.92
CLTCL1P53675 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC27.04■■□□□ 1.92
CLTCL1P53675 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC27.04■■□□□ 1.92
CLTCL1P53675 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CLTCL1P53675 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 RN7SL510P-201ENST00000581311 263 ntBASIC27.04■■□□□ 1.92
CLTCL1P53675 AL390719.2-201ENST00000606993 987 ntBASIC27.04■■□□□ 1.92
CLTCL1P53675 AC068587.9-201ENST00000641814 219 ntBASIC27.04■■□□□ 1.92
CLTCL1P53675 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC27.04■■□□□ 1.92
CLTCL1P53675 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC27.04■■□□□ 1.92
CLTCL1P53675 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.04■■□□□ 1.92
CLTCL1P53675 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CLTCL1P53675 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC27.03■■□□□ 1.92
CLTCL1P53675 MTMR9LP-203ENST00000426597 1545 ntBASIC27.03■■□□□ 1.92
CLTCL1P53675 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 AL158211.5-201ENST00000623583 2518 ntBASIC27.03■■□□□ 1.92
CLTCL1P53675 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC27.03■■□□□ 1.92
CLTCL1P53675 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC27.03■■□□□ 1.92
CLTCL1P53675 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC27.03■■□□□ 1.92
CLTCL1P53675 UNC93B7-201ENST00000509439 705 ntBASIC27.03■■□□□ 1.92
CLTCL1P53675 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC27.03■■□□□ 1.92
CLTCL1P53675 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CLTCL1P53675 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC27.03■■□□□ 1.92
CLTCL1P53675 AL691432.3-201ENST00000621860 400 ntBASIC27.03■■□□□ 1.92
CLTCL1P53675 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC27.03■■□□□ 1.92
CLTCL1P53675 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
CLTCL1P53675 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC27.03■■□□□ 1.92
CLTCL1P53675 FP475955.4-201ENST00000623131 1990 ntBASIC27.03■■□□□ 1.92
CLTCL1P53675 KRT8P7-201ENST00000533003 1432 ntBASIC27.03■■□□□ 1.92
CLTCL1P53675 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CLTCL1P53675 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CLTCL1P53675 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC27.02■■□□□ 1.92
CLTCL1P53675 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC27.02■■□□□ 1.92
CLTCL1P53675 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC27.02■■□□□ 1.92
CLTCL1P53675 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CLTCL1P53675 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CLTCL1P53675 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CLTCL1P53675 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CLTCL1P53675 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms