Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC1P29353 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC1P29353 CROCCP3-202ENST00000420820 1947 ntBASIC17.32■□□□□ 0.36
SHC1P29353 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC1P29353 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC1P29353 AC091390.4-202ENST00000476426 537 ntBASIC17.32■□□□□ 0.36
SHC1P29353 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.32■□□□□ 0.36
SHC1P29353 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC1P29353 AC026271.3-201ENST00000571884 352 ntBASIC17.32■□□□□ 0.36
SHC1P29353 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHC1P29353 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC1P29353 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 AL049812.1-201ENST00000432563 2267 ntBASIC17.32■□□□□ 0.36
SHC1P29353 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHC1P29353 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC1P29353 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SHC1P29353 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHC1P29353 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHC1P29353 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC1P29353 AC116562.2-201ENST00000507042 360 ntBASIC17.31■□□□□ 0.36
SHC1P29353 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.31■□□□□ 0.36
SHC1P29353 AL355075.4-201ENST00000554988 638 ntBASIC17.31■□□□□ 0.36
SHC1P29353 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 MIR4785-201ENST00000585005 73 ntBASIC17.31■□□□□ 0.36
SHC1P29353 AC011298.2-201ENST00000617989 482 ntBASIC17.31■□□□□ 0.36
SHC1P29353 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 TEX21P-204ENST00000641479 1693 ntBASIC17.31■□□□□ 0.36
SHC1P29353 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.31■□□□□ 0.36
SHC1P29353 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC1P29353 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC1P29353 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC1P29353 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHC1P29353 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC1P29353 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC1P29353 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.3■□□□□ 0.36
SHC1P29353 AC004951.3-201ENST00000418645 1148 ntBASIC17.3■□□□□ 0.36
SHC1P29353 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.3■□□□□ 0.36
SHC1P29353 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.3■□□□□ 0.36
SHC1P29353 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC1P29353 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC1P29353 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC1P29353 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SHC1P29353 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHC1P29353 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC1P29353 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC1P29353 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC1P29353 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SHC1P29353 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.29■□□□□ 0.36
SHC1P29353 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC1P29353 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC1P29353 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SHC1P29353 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.29■□□□□ 0.36
SHC1P29353 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms