Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.05■□□□□ 0.64
COL4A2P08572 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A2P08572 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL4A2P08572 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A2P08572 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 IGHV3-47-201ENST00000425060 335 ntBASIC19.04■□□□□ 0.64
COL4A2P08572 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL4A2P08572 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.04■□□□□ 0.64
COL4A2P08572 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A2P08572 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A2P08572 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A2P08572 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.04■□□□□ 0.64
COL4A2P08572 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A2P08572 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.03■□□□□ 0.64
COL4A2P08572 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 AL121912.1-201ENST00000603683 238 ntBASIC19.03■□□□□ 0.64
COL4A2P08572 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 REXO1L6P-202ENST00000619970 1078 ntBASIC19.03■□□□□ 0.64
COL4A2P08572 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.03■□□□□ 0.64
COL4A2P08572 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.03■□□□□ 0.64
COL4A2P08572 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.03■□□□□ 0.64
COL4A2P08572 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 AL121772.3-201ENST00000610840 674 ntBASIC19.03■□□□□ 0.64
COL4A2P08572 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL4A2P08572 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL4A2P08572 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.02■□□□□ 0.64
COL4A2P08572 SAPCD2P3-201ENST00000455031 850 ntBASIC19.02■□□□□ 0.63
COL4A2P08572 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.02■□□□□ 0.63
COL4A2P08572 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
COL4A2P08572 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.02■□□□□ 0.63
COL4A2P08572 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COL4A2P08572 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COL4A2P08572 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL4A2P08572 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.01■□□□□ 0.63
COL4A2P08572 IGHGP-201ENST00000390555 1178 ntBASIC19.01■□□□□ 0.63
COL4A2P08572 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.01■□□□□ 0.63
COL4A2P08572 AP003733.1-201ENST00000491725 852 ntBASIC19.01■□□□□ 0.63
COL4A2P08572 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
COL4A2P08572 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
COL4A2P08572 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.01■□□□□ 0.63
COL4A2P08572 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A2P08572 NSUN5P1-202ENST00000421140 1535 ntBASIC19.01■□□□□ 0.63
COL4A2P08572 NSUN5P2-203ENST00000457352 1529 ntBASIC19.01■□□□□ 0.63
COL4A2P08572 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms