Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBB4AP04350 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBB4AP04350 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TUBB4AP04350 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBB4AP04350 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBB4AP04350 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBB4AP04350 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TUBB4AP04350 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB4AP04350 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBB4AP04350 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
TUBB4AP04350 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
TUBB4AP04350 AC026271.2-201ENST00000428091 497 ntBASIC20.24■□□□□ 0.83
TUBB4AP04350 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.24■□□□□ 0.83
TUBB4AP04350 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
TUBB4AP04350 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBB4AP04350 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TUBB4AP04350 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
TUBB4AP04350 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TUBB4AP04350 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB4AP04350 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBB4AP04350 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.23■□□□□ 0.83
TUBB4AP04350 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TUBB4AP04350 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBB4AP04350 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 MIR5787-201ENST00000611784 55 ntBASIC20.23■□□□□ 0.83
TUBB4AP04350 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBB4AP04350 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBB4AP04350 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
TUBB4AP04350 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 AL645608.8-201ENST00000606034 2086 ntBASIC20.23■□□□□ 0.83
TUBB4AP04350 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.23■□□□□ 0.83
TUBB4AP04350 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TUBB4AP04350 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
TUBB4AP04350 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBB4AP04350 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB4AP04350 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms