Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.72■□□□□ 0.91
VTNP04004 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VTNP04004 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
VTNP04004 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.72■□□□□ 0.91
VTNP04004 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
VTNP04004 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.72■□□□□ 0.91
VTNP04004 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.72■□□□□ 0.91
VTNP04004 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.72■□□□□ 0.91
VTNP04004 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VTNP04004 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VTNP04004 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VTNP04004 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.72■□□□□ 0.91
VTNP04004 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.72■□□□□ 0.91
VTNP04004 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.72■□□□□ 0.91
VTNP04004 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.72■□□□□ 0.91
VTNP04004 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTNP04004 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 AC141586.3-201ENST00000562166 1838 ntBASIC20.71■□□□□ 0.91
VTNP04004 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.71■□□□□ 0.91
VTNP04004 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.71■□□□□ 0.91
VTNP04004 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VTNP04004 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VTNP04004 AC093484.2-201ENST00000580996 2166 ntBASIC20.71■□□□□ 0.91
VTNP04004 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.71■□□□□ 0.91
VTNP04004 VENTXP5-201ENST00000523979 775 ntBASIC20.71■□□□□ 0.91
VTNP04004 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 ZNF444P1-201ENST00000559497 298 ntBASIC20.71■□□□□ 0.91
VTNP04004 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.71■□□□□ 0.91
VTNP04004 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.71■□□□□ 0.91
VTNP04004 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.71■□□□□ 0.91
VTNP04004 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
VTNP04004 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 AC008556.1-201ENST00000610908 2040 ntBASIC20.71■□□□□ 0.91
VTNP04004 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VTNP04004 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
VTNP04004 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTNP04004 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.7■□□□□ 0.9
VTNP04004 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.7■□□□□ 0.9
VTNP04004 RASA4DP-201ENST00000460726 1199 ntBASIC20.7■□□□□ 0.9
VTNP04004 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.7■□□□□ 0.9
VTNP04004 AC092597.1-201ENST00000487352 616 ntBASIC20.7■□□□□ 0.9
VTNP04004 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.7■□□□□ 0.9
VTNP04004 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.7■□□□□ 0.9
VTNP04004 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.7■□□□□ 0.9
VTNP04004 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.7■□□□□ 0.9
VTNP04004 AC116407.4-201ENST00000623319 1061 ntBASIC20.7■□□□□ 0.9
VTNP04004 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.7■□□□□ 0.9
VTNP04004 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.7■□□□□ 0.9
VTNP04004 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 AL032819.2-201ENST00000624543 2162 ntBASIC20.7■□□□□ 0.9
VTNP04004 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.7■□□□□ 0.9
VTNP04004 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTNP04004 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VTNP04004 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.7■□□□□ 0.9
VTNP04004 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.69■□□□□ 0.9
VTNP04004 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
VTNP04004 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTNP04004 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTNP04004 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTNP04004 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VTNP04004 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.69■□□□□ 0.9
VTNP04004 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTNP04004 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.69■□□□□ 0.9
VTNP04004 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.69■□□□□ 0.9
VTNP04004 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms