Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.21■□□□□ 0.99
GGPS1O95749 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.21■□□□□ 0.99
GGPS1O95749 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.21■□□□□ 0.99
GGPS1O95749 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
GGPS1O95749 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.21■□□□□ 0.99
GGPS1O95749 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GGPS1O95749 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
GGPS1O95749 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
GGPS1O95749 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GGPS1O95749 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 AL158211.5-201ENST00000623583 2518 ntBASIC21.2■□□□□ 0.98
GGPS1O95749 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.2■□□□□ 0.98
GGPS1O95749 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.2■□□□□ 0.98
GGPS1O95749 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.2■□□□□ 0.98
GGPS1O95749 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.2■□□□□ 0.98
GGPS1O95749 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.2■□□□□ 0.98
GGPS1O95749 MIR3180-5-201ENST00000583743 153 ntBASIC21.2■□□□□ 0.98
GGPS1O95749 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.2■□□□□ 0.98
GGPS1O95749 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
GGPS1O95749 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.2■□□□□ 0.98
GGPS1O95749 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.2■□□□□ 0.98
GGPS1O95749 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.2■□□□□ 0.98
GGPS1O95749 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GGPS1O95749 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GGPS1O95749 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.19■□□□□ 0.98
GGPS1O95749 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GGPS1O95749 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
GGPS1O95749 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.19■□□□□ 0.98
GGPS1O95749 VENTXP5-201ENST00000523979 775 ntBASIC21.19■□□□□ 0.98
GGPS1O95749 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.19■□□□□ 0.98
GGPS1O95749 AC024243.1-201ENST00000609234 778 ntBASIC21.19■□□□□ 0.98
GGPS1O95749 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.19■□□□□ 0.98
GGPS1O95749 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GGPS1O95749 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.19■□□□□ 0.98
GGPS1O95749 LINC01311-201ENST00000565162 1445 ntBASIC21.19■□□□□ 0.98
GGPS1O95749 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.19■□□□□ 0.98
GGPS1O95749 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GGPS1O95749 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.18■□□□□ 0.98
GGPS1O95749 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.18■□□□□ 0.98
GGPS1O95749 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.18■□□□□ 0.98
GGPS1O95749 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
GGPS1O95749 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.18■□□□□ 0.98
GGPS1O95749 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.18■□□□□ 0.98
GGPS1O95749 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 ZNF444P1-201ENST00000559497 298 ntBASIC21.18■□□□□ 0.98
GGPS1O95749 AL136038.3-201ENST00000561909 1096 ntBASIC21.18■□□□□ 0.98
GGPS1O95749 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.18■□□□□ 0.98
GGPS1O95749 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.18■□□□□ 0.98
GGPS1O95749 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GGPS1O95749 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
GGPS1O95749 AC116407.4-201ENST00000623319 1061 ntBASIC21.18■□□□□ 0.98
GGPS1O95749 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
GGPS1O95749 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.18■□□□□ 0.98
GGPS1O95749 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms