Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.26■□□□□ 0.83
CSPG5O95196 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 AC004870.1-201ENST00000315132 882 ntBASIC20.26■□□□□ 0.83
CSPG5O95196 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CSPG5O95196 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.26■□□□□ 0.83
CSPG5O95196 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 AC011498.5-201ENST00000592027 486 ntBASIC20.26■□□□□ 0.83
CSPG5O95196 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CSPG5O95196 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CSPG5O95196 GPAT2P1-201ENST00000444924 1672 ntBASIC20.26■□□□□ 0.83
CSPG5O95196 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.25■□□□□ 0.83
CSPG5O95196 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG5O95196 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CSPG5O95196 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.25■□□□□ 0.83
CSPG5O95196 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG5O95196 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 AP002414.4-201ENST00000589764 1148 ntBASIC20.25■□□□□ 0.83
CSPG5O95196 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.25■□□□□ 0.83
CSPG5O95196 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.25■□□□□ 0.83
CSPG5O95196 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.25■□□□□ 0.83
CSPG5O95196 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CSPG5O95196 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CSPG5O95196 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSPG5O95196 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CSPG5O95196 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.24■□□□□ 0.83
CSPG5O95196 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG5O95196 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.24■□□□□ 0.83
CSPG5O95196 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG5O95196 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG5O95196 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.24■□□□□ 0.83
CSPG5O95196 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG5O95196 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.24■□□□□ 0.83
CSPG5O95196 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 AL732292.2-201ENST00000609649 430 ntBASIC20.24■□□□□ 0.83
CSPG5O95196 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
CSPG5O95196 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CSPG5O95196 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.24■□□□□ 0.83
CSPG5O95196 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSPG5O95196 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 AC016734.2-201ENST00000624325 1377 ntBASIC20.23■□□□□ 0.83
CSPG5O95196 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSPG5O95196 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 AC034232.1-201ENST00000506026 1064 ntBASIC20.23■□□□□ 0.83
CSPG5O95196 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.23■□□□□ 0.83
CSPG5O95196 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.23■□□□□ 0.83
CSPG5O95196 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSPG5O95196 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.23■□□□□ 0.83
CSPG5O95196 AL121672.3-201ENST00000608644 468 ntBASIC20.23■□□□□ 0.83
CSPG5O95196 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CSPG5O95196 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.23■□□□□ 0.83
CSPG5O95196 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSPG5O95196 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms