Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PTCD1O75127 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.25■■□□□ 1.47
PTCD1O75127 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD1O75127 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD1O75127 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD1O75127 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.24■■□□□ 1.47
PTCD1O75127 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.24■■□□□ 1.47
PTCD1O75127 Z82202.1-201ENST00000623446 1880 ntBASIC24.24■■□□□ 1.47
PTCD1O75127 LINC01521-201ENST00000504184 1943 ntBASIC24.24■■□□□ 1.47
PTCD1O75127 TSPY22P-201ENST00000427496 604 ntBASIC24.24■■□□□ 1.47
PTCD1O75127 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.24■■□□□ 1.47
PTCD1O75127 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.24■■□□□ 1.47
PTCD1O75127 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.24■■□□□ 1.47
PTCD1O75127 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.24■■□□□ 1.47
PTCD1O75127 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
PTCD1O75127 RNF126P1-202ENST00000569893 925 ntBASIC24.24■■□□□ 1.47
PTCD1O75127 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.24■■□□□ 1.47
PTCD1O75127 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.24■■□□□ 1.47
PTCD1O75127 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.24■■□□□ 1.47
PTCD1O75127 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.24■■□□□ 1.47
PTCD1O75127 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD1O75127 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.24■■□□□ 1.47
PTCD1O75127 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD1O75127 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.24■■□□□ 1.47
PTCD1O75127 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PTCD1O75127 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PTCD1O75127 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.23■■□□□ 1.47
PTCD1O75127 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCD1O75127 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCD1O75127 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.23■■□□□ 1.47
PTCD1O75127 AC093525.10-201ENST00000625130 1569 ntBASIC24.23■■□□□ 1.47
PTCD1O75127 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 AC008556.1-201ENST00000610908 2040 ntBASIC24.23■■□□□ 1.47
PTCD1O75127 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.23■■□□□ 1.47
PTCD1O75127 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD1O75127 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
PTCD1O75127 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCD1O75127 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCD1O75127 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PTCD1O75127 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCD1O75127 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PTCD1O75127 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
PTCD1O75127 MIR662-201ENST00000384847 95 ntBASIC24.22■■□□□ 1.47
PTCD1O75127 CHCHD2P8-201ENST00000429873 447 ntBASIC24.22■■□□□ 1.47
PTCD1O75127 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 AC111152.3-201ENST00000569699 673 ntBASIC24.22■■□□□ 1.47
PTCD1O75127 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.22■■□□□ 1.47
PTCD1O75127 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PTCD1O75127 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD1O75127 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PTCD1O75127 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.21■■□□□ 1.47
PTCD1O75127 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 KRT18P1-202ENST00000452408 1331 ntBASIC24.21■■□□□ 1.47
PTCD1O75127 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.21■■□□□ 1.47
PTCD1O75127 FDX1P1-201ENST00000449115 551 ntBASIC24.21■■□□□ 1.47
PTCD1O75127 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.21■■□□□ 1.47
PTCD1O75127 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.21■■□□□ 1.47
PTCD1O75127 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.21■■□□□ 1.47
PTCD1O75127 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCD1O75127 RCC2P3-201ENST00000418112 1537 ntBASIC24.2■■□□□ 1.47
PTCD1O75127 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCD1O75127 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD1O75127 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms