Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
XRCC2O43543 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
XRCC2O43543 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
XRCC2O43543 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 CROCCP3-202ENST00000420820 1947 ntBASIC16.43■□□□□ 0.22
XRCC2O43543 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 AC004951.3-201ENST00000418645 1148 ntBASIC16.43■□□□□ 0.22
XRCC2O43543 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
XRCC2O43543 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
XRCC2O43543 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.43■□□□□ 0.22
XRCC2O43543 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 AC083906.6-201ENST00000641366 219 ntBASIC16.43■□□□□ 0.22
XRCC2O43543 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.43■□□□□ 0.22
XRCC2O43543 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.43■□□□□ 0.22
XRCC2O43543 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
XRCC2O43543 RCC2P6-201ENST00000526625 1557 ntBASIC16.43■□□□□ 0.22
XRCC2O43543 AC093525.10-201ENST00000625130 1569 ntBASIC16.43■□□□□ 0.22
XRCC2O43543 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.42■□□□□ 0.22
XRCC2O43543 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC2O43543 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
XRCC2O43543 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
XRCC2O43543 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
XRCC2O43543 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.42■□□□□ 0.22
XRCC2O43543 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
XRCC2O43543 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC2O43543 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.42■□□□□ 0.22
XRCC2O43543 AC142381.4-202ENST00000563973 229 ntBASIC16.42■□□□□ 0.22
XRCC2O43543 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.42■□□□□ 0.22
XRCC2O43543 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
XRCC2O43543 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 AC090340.1-201ENST00000620778 4980 ntBASIC16.42■□□□□ 0.22
XRCC2O43543 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.42■□□□□ 0.22
XRCC2O43543 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
XRCC2O43543 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
XRCC2O43543 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 PRORSD1P-201ENST00000295112 541 ntBASIC16.41■□□□□ 0.22
XRCC2O43543 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
XRCC2O43543 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
XRCC2O43543 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.41■□□□□ 0.22
XRCC2O43543 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.41■□□□□ 0.22
XRCC2O43543 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.41■□□□□ 0.22
XRCC2O43543 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.41■□□□□ 0.22
XRCC2O43543 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.41■□□□□ 0.22
XRCC2O43543 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms