Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.03■□□□□ 0.48
RTCAO00442 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.03■□□□□ 0.48
RTCAO00442 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTCAO00442 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RTCAO00442 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
RTCAO00442 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RTCAO00442 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.02■□□□□ 0.48
RTCAO00442 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.02■□□□□ 0.48
RTCAO00442 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTCAO00442 MFAP1P1-201ENST00000442257 1255 ntBASIC18.02■□□□□ 0.48
RTCAO00442 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.02■□□□□ 0.48
RTCAO00442 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.02■□□□□ 0.48
RTCAO00442 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.02■□□□□ 0.48
RTCAO00442 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.02■□□□□ 0.48
RTCAO00442 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.02■□□□□ 0.48
RTCAO00442 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.02■□□□□ 0.48
RTCAO00442 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.02■□□□□ 0.48
RTCAO00442 MIR4785-201ENST00000585005 73 ntBASIC18.02■□□□□ 0.48
RTCAO00442 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.02■□□□□ 0.47
RTCAO00442 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTCAO00442 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTCAO00442 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.02■□□□□ 0.47
RTCAO00442 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RTCAO00442 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.02■□□□□ 0.47
RTCAO00442 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RTCAO00442 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTCAO00442 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTCAO00442 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.01■□□□□ 0.47
RTCAO00442 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.01■□□□□ 0.47
RTCAO00442 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 CRYGFP-201ENST00000418459 633 ntBASIC18.01■□□□□ 0.47
RTCAO00442 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.01■□□□□ 0.47
RTCAO00442 RBM17P1-201ENST00000453646 1190 ntBASIC18.01■□□□□ 0.47
RTCAO00442 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 TSPY15P-201ENST00000457163 923 ntBASIC18.01■□□□□ 0.47
RTCAO00442 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 DGCR10-201ENST00000609839 495 ntBASIC18.01■□□□□ 0.47
RTCAO00442 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.01■□□□□ 0.47
RTCAO00442 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
RTCAO00442 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTCAO00442 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.01■□□□□ 0.47
RTCAO00442 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18■□□□□ 0.47
RTCAO00442 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RTCAO00442 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18■□□□□ 0.47
RTCAO00442 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18■□□□□ 0.47
RTCAO00442 AL355075.4-201ENST00000554988 638 ntBASIC18■□□□□ 0.47
RTCAO00442 MIR4497-201ENST00000583208 89 ntBASIC18■□□□□ 0.47
RTCAO00442 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RTCAO00442 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18■□□□□ 0.47
RTCAO00442 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18■□□□□ 0.47
RTCAO00442 AC096733.2-201ENST00000609937 1394 ntBASIC18■□□□□ 0.47
RTCAO00442 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
RTCAO00442 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RTCAO00442 AC079598.2-202ENST00000546624 1451 ntBASIC18■□□□□ 0.47
RTCAO00442 KATNBL1P6-202ENST00000562413 1466 ntBASIC18■□□□□ 0.47
RTCAO00442 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTCAO00442 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.99■□□□□ 0.47
RTCAO00442 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTCAO00442 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTCAO00442 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms