Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
HCN4Q9Y3Q4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 RNA5SP125-201ENST00000364843 120 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 Y_RNA.369-201ENST00000365568 117 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 RNU7-94P-201ENST00000459576 63 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 AL049830.1-201ENST00000468034 425 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 RN7SL594P-201ENST00000470590 287 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 RPS26P48-201ENST00000491713 339 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 RNA5SP458-201ENST00000516188 119 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 uc_338.28-201ENST00000612082 187 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 AL355596.1-201ENST00000565399 3996 ntBASIC3.35□□□□□ -1.87
HCN4Q9Y3Q4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 AC068647.1-201ENST00000489539 2265 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 Y_RNA.4-201ENST00000362333 112 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 Y_RNA.85-201ENST00000363014 111 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 RNU6-1107P-201ENST00000364817 104 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 MIR515-2-201ENST00000384883 83 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 MIR515-1-201ENST00000384884 83 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 AL117342.1-201ENST00000404861 406 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 RN7SL636P-201ENST00000497504 294 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 RNA5SP24-201ENST00000516478 95 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 AC024995.1-201ENST00000523014 93 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 AP002004.2-201ENST00000531656 154 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 MIR5197-201ENST00000583721 112 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 AC064859.1-201ENST00000624741 174 ntBASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN4Q9Y3Q4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
HCN4Q9Y3Q4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HCN4Q9Y3Q4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 Y_RNA.99-201ENST00000363138 105 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 Y_RNA.677-201ENST00000516401 85 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 AC006441.5-201ENST00000612680 209 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 AC134878.1-201ENST00000619901 243 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 AC106754.2-201ENST00000623006 233 ntBASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
HCN4Q9Y3Q4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 SNORA1B-201ENST00000362535 133 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 SNORD114-6-201ENST00000364393 72 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 Y_RNA.366-201ENST00000365540 102 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 RNU6-220P-201ENST00000390919 107 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 RNU6-554P-201ENST00000410466 106 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 AC010401.1-201ENST00000463867 348 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 MIR4762-201ENST00000585261 75 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 MIR376A2-201ENST00000636782 80 ntBASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HCN4Q9Y3Q4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 SNORD12C-201ENST00000386307 89 ntBASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 AC099677.2-201ENST00000436385 175 ntBASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN4Q9Y3Q4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 MIR30E-201ENST00000362104 92 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 SNORA25B-201ENST00000365507 128 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 MIR196B-201ENST00000384852 84 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 RNA5SP323-201ENST00000391094 133 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 MIR1287-201ENST00000408492 90 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 ATP5J2P3-201ENST00000451550 258 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 RNA5SP445-201ENST00000515889 115 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HCN4Q9Y3Q4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 U8.5-201ENST00000364528 136 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 Y_RNA.338-201ENST00000365320 114 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 SNORA8-201ENST00000384574 139 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 SNORA26.7-201ENST00000391288 122 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 CST2P1-201ENST00000425770 87 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 AL591806.2-201ENST00000433122 173 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 AC108938.1-201ENST00000451204 136 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 RNU6-537P-201ENST00000517277 103 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 AC004486.1-201ENST00000546846 233 ntBASIC3.29□□□□□ -1.88
HCN4Q9Y3Q4 AC022217.4-201ENST00000604389 163 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms