Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS9D1Q9Y2B5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 Z83843.1-201ENST00000604070 3685 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 SPRR2C-201ENST00000290702 219 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 RNA5SP322-201ENST00000363617 119 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 Y_RNA.173-201ENST00000363776 113 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-865P-201ENST00000364772 107 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-686P-201ENST00000364839 107 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 SRIP3-201ENST00000413200 219 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 AC015922.2-201ENST00000435593 184 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 RN7SL297P-201ENST00000483161 293 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-958P-201ENST00000516995 106 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 AC020891.4-201ENST00000605745 93 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 MIR6500-201ENST00000622700 86 ntBASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS9D1Q9Y2B5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 SNORA1.2-201ENST00000365189 134 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 RNA5SP283-201ENST00000365604 119 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 Y_RNA.386-201ENST00000383913 105 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 AL162151.2-201ENST00000448875 158 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 RNU7-67P-201ENST00000459003 62 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 snoU13.11-201ENST00000459219 104 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
VPS9D1Q9Y2B5 AC002546.1-201ENST00000588041 2504 ntBASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 AC087499.7-201ENST00000441958 109 ntBASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-1116P-201ENST00000517269 99 ntBASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 AL606490.9-201ENST00000603331 271 ntBASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 AC012676.2-201ENST00000619258 186 ntBASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS9D1Q9Y2B5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 RNA5SP387-201ENST00000364226 106 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 SNORD38.2-201ENST00000384470 69 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 CST2P1-201ENST00000425770 87 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 AC245047.3-201ENST00000429428 127 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 ATP5J2P3-201ENST00000451550 258 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 AC234781.5-201ENST00000508429 271 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 RNA5SP143-201ENST00000516936 115 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-448P-201ENST00000517052 107 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 MIR4791-201ENST00000607666 84 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 MIR5739-201ENST00000619803 80 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 AC027279.3-201ENST00000625055 122 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 AL442644.1-201ENST00000454390 3105 ntBASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS9D1Q9Y2B5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 SNORD6-201ENST00000365444 73 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 Y_RNA.448-201ENST00000384185 108 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-649P-201ENST00000384463 107 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-634P-201ENST00000459134 106 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 RN7SL636P-201ENST00000497504 294 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS9D1Q9Y2B5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 RNU1-23P-201ENST00000363361 144 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 RNA5SP138-201ENST00000365098 114 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 SNORA48.7-201ENST00000391302 135 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-628P-201ENST00000410675 107 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 RNU6-1190P-201ENST00000410811 104 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 AL117339.2-201ENST00000430475 180 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 SNORA84-201ENST00000459229 133 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 AC091153.1-201ENST00000466297 402 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 MTND5P40-201ENST00000559945 246 ntBASIC3.78□□□□□ -1.8
VPS9D1Q9Y2B5 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms