Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
COL20A1Q9P218 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
COL20A1Q9P218 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
COL20A1Q9P218 AC100821.1-201ENST00000523153 2479 ntBASIC2.1□□□□□ -2.07
COL20A1Q9P218 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL20A1Q9P218 RNY1-201ENST00000364228 113 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 Y_RNA.539-201ENST00000384635 107 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 RNA5SP109-201ENST00000391010 116 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 SNORA26.5-201ENST00000391215 123 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC009310.1-201ENST00000414414 451 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC233266.1-201ENST00000454518 96 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 Y_RNA.637-201ENST00000459424 114 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.09□□□□□ -2.07
COL20A1Q9P218 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 RNU2-56P-201ENST00000516826 190 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC024405.2-202ENST00000532731 184 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC011604.1-201ENST00000545978 196 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC127455.1-201ENST00000565496 145 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
COL20A1Q9P218 MIR8081-201ENST00000611533 95 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC242852.1-201ENST00000612151 96 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC013791.1-201ENST00000616619 62 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC141273.2-201ENST00000618989 130 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC244015.1-201ENST00000622301 99 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 snoU18.1-201ENST00000629629 71 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
COL20A1Q9P218 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.08
COL20A1Q9P218 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL20A1Q9P218 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL20A1Q9P218 Y_RNA.122-201ENST00000363331 96 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 U8.7-201ENST00000364940 136 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 Y_RNA.552-201ENST00000384665 112 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 RN7SKP200-201ENST00000410564 320 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 COX6CP10-201ENST00000416832 224 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 FTH1P12-201ENST00000432137 551 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
COL20A1Q9P218 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 RPL23AP54-201ENST00000495129 419 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 RNU7-28P-201ENST00000516759 62 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 RNU6-111P-201ENST00000517179 105 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
COL20A1Q9P218 MIR4643-201ENST00000577473 78 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 MIR5692C2-201ENST00000577959 77 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 SNORA28-201ENST00000606769 126 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 AC073349.3-201ENST00000617616 186 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
COL20A1Q9P218 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
COL20A1Q9P218 Y_RNA.117-201ENST00000363294 101 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 RNU6-1205P-201ENST00000363625 106 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 RNU6-211P-201ENST00000384047 107 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 RNU2-14P-201ENST00000411053 191 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 Y_RNA.621-201ENST00000411065 96 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.07□□□□□ -2.08
COL20A1Q9P218 RNU6-1291P-201ENST00000516591 104 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 AC005357.1-201ENST00000588399 301 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 MIR8054-201ENST00000620877 86 ntBASIC2.07□□□□□ -2.08
COL20A1Q9P218 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.07□□□□□ -2.08
COL20A1Q9P218 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
COL20A1Q9P218 AC134026.1-201ENST00000623249 2239 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL20A1Q9P218 RNU6-1048P-201ENST00000364054 107 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 RNU6-338P-201ENST00000383888 105 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 RNU6-440P-201ENST00000390882 105 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 RNU6-360P-201ENST00000390944 104 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 AL627390.1-201ENST00000396055 340 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 SNORA36B-201ENST00000410438 131 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.06□□□□□ -2.08
COL20A1Q9P218 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 AL049830.1-201ENST00000468034 425 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 COX6CP14-201ENST00000469580 174 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
COL20A1Q9P218 AL008718.3-201ENST00000610217 321 ntBASIC2.06□□□□□ -2.08
COL20A1Q9P218 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
COL20A1Q9P218 Y_RNA.76-201ENST00000362931 109 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 HSPE1P9-201ENST00000440046 311 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.05□□□□□ -2.08
COL20A1Q9P218 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU6-437P-201ENST00000459408 95 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.05□□□□□ -2.08
COL20A1Q9P218 AC107393.1-201ENST00000512403 346 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU6-250P-201ENST00000516958 103 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU6-388P-201ENST00000517012 105 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU6-389P-201ENST00000517048 105 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNA5SP437-201ENST00000517249 129 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 RNU6-794P-201ENST00000517261 64 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
COL20A1Q9P218 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 MIR2681-201ENST00000581814 105 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.05□□□□□ -2.08
COL20A1Q9P218 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms