Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP006437.1-201ENST00000641440 3685 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 Y_RNA.37-201ENST00000362606 108 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 SNORA38-201ENST00000363946 132 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-546P-201ENST00000383991 107 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 RPL21P3-201ENST00000395517 478 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 MRPL35P3-201ENST00000421557 364 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 AC003685.2-201ENST00000422795 395 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 AC113410.1-201ENST00000505029 247 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 AC012531.4-201ENST00000616509 177 ntBASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
CUEDC1Q9NWM3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-363P-201ENST00000362895 105 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-19-201ENST00000363098 82 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-18-201ENST00000363293 82 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 RNA5SP50-201ENST00000363731 107 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 SNORD115-17-201ENST00000364612 82 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.440-201ENST00000384120 114 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 MIR522-201ENST00000385071 87 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 BX510359.1-201ENST00000456973 237 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 RNU2-35P-201ENST00000516446 142 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-1291P-201ENST00000516591 104 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 SNORA48.11-201ENST00000517015 89 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 MIR3922-201ENST00000585192 84 ntBASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
CUEDC1Q9NWM3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 RNA5SP42-201ENST00000364278 115 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.360-201ENST00000365512 102 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-442P-201ENST00000383968 104 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 MIR577-201ENST00000385196 96 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-733P-201ENST00000410759 104 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 AL049873.1-201ENST00000480540 376 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-965P-201ENST00000516721 96 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 MIR3618-201ENST00000580330 88 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 AC087741.2-201ENST00000619415 172 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 AC131280.1-202ENST00000624067 4211 ntBASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CUEDC1Q9NWM3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-1125P-201ENST00000363601 107 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-409P-201ENST00000384114 104 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 SNORA18-201ENST00000384416 132 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 MIR95-201ENST00000385072 81 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 SNORA48.2-201ENST00000390926 124 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-1186P-201ENST00000410429 97 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 AL353689.1-201ENST00000438895 199 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU7-26P-201ENST00000458980 63 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 AC139453.2-201ENST00000487255 133 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RPL23AP94-201ENST00000512518 302 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-162P-201ENST00000516228 103 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-795P-201ENST00000516323 103 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RNU7-25P-201ENST00000516544 62 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 U4.6-201ENST00000621618 127 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 MIR6079-201ENST00000635807 62 ntBASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CUEDC1Q9NWM3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.155-201ENST00000363632 101 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 SNORA38.1-201ENST00000364172 131 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-60P-201ENST00000364792 103 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.351-201ENST00000365436 96 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.426-201ENST00000384068 113 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.437-201ENST00000384113 113 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 Y_RNA.547-201ENST00000384654 119 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 RNU6-402P-201ENST00000410678 103 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 AL445646.1-201ENST00000431784 216 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 HMGN2P34-201ENST00000437647 269 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 AC087499.4-201ENST00000448505 178 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 PHBP14-201ENST00000512887 367 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 RNU7-128P-201ENST00000517247 62 ntBASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CUEDC1Q9NWM3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CUEDC1Q9NWM3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms