Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-424P-201ENST00000384367 105 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.574-201ENST00000384766 95 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 SNORA26.9-201ENST00000391322 122 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.621-201ENST00000411065 96 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 AC104332.1-201ENST00000440471 797 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 HSPE1P24-201ENST00000450782 238 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-1338P-201ENST00000516328 91 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 RNU7-115P-201ENST00000516433 55 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 POLR3GP1-201ENST00000594073 261 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 MIR548AY-201ENST00000617669 107 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 AC099654.10-201ENST00000640395 161 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 MIR302D-201ENST00000362275 68 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.16-201ENST00000362421 102 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-801P-201ENST00000364087 105 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 RNU4-41P-201ENST00000364426 143 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 RPL30P13-201ENST00000418873 348 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 MTND2P23-201ENST00000422990 651 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 TRBVB-201ENST00000477100 408 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-570P-201ENST00000517051 105 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AC024405.2-202ENST00000532731 184 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AC008269.2-201ENST00000561915 1105 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AC127455.1-201ENST00000565496 145 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AL512605.2-201ENST00000592972 256 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AL353621.2-201ENST00000605340 133 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 AL078604.3-201ENST00000615580 211 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-238P-201ENST00000363313 106 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.176-201ENST00000363815 109 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.512-201ENST00000384518 102 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-1105P-201ENST00000384774 107 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 MIR513A1-201ENST00000385138 129 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 MIR660-201ENST00000385235 97 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 AL358176.2-201ENST00000425769 204 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 Z98949.2-201ENST00000440996 144 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 AC117454.1-201ENST00000491120 168 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 AC091959.1-201ENST00000495857 238 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 SERF1AP1-201ENST00000514575 187 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 MIR8062-201ENST00000621515 85 ntBASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
SLC6A13Q9NSD5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 U8.7-201ENST00000364940 136 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.376-201ENST00000365638 108 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 SNORA26.5-201ENST00000391215 123 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 CYCSP49-201ENST00000420810 319 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 CALM2P4-201ENST00000430810 426 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 RNU7-141P-201ENST00000459304 62 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-1045P-201ENST00000516321 107 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 RNA5SP168-201ENST00000516642 112 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 AL591926.4-201ENST00000616895 298 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 SNORD3E-202ENST00000627253 216 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 U6.104-201ENST00000637979 90 ntBASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SLC6A13Q9NSD5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 MIRLET7C-201ENST00000362160 84 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.149-201ENST00000363558 117 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-1048P-201ENST00000364054 107 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 U8.5-201ENST00000364528 136 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.253-201ENST00000364562 112 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 U8.16-201ENST00000391279 133 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RNU2-14P-201ENST00000411053 191 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RPL23AP54-201ENST00000495129 419 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RNA5SP182-201ENST00000516064 82 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 AP001282.2-201ENST00000616149 309 ntBASIC1.57□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-1309P-201ENST00000363305 108 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.461-201ENST00000384263 103 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 MIR1302-6-201ENST00000408466 90 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 SNORA27.4-201ENST00000516650 95 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 DEFB108E-201ENST00000524692 240 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 MIR4762-201ENST00000585261 75 ntBASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SLC6A13Q9NSD5 UBE2WP1-201ENST00000362030 340 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 Y_RNA.47-201ENST00000362697 108 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-1272P-201ENST00000362776 107 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 SNORD68-201ENST00000363214 84 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-899P-201ENST00000363947 107 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 RNA5SP259-201ENST00000365541 109 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 RNU6-763P-201ENST00000390865 106 ntBASIC1.55□□□□□ -2.16
SLC6A13Q9NSD5 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms