Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 AC245166.1-201ENST00000521012 253 ntBASIC3.25□□□□□ -1.89
VRTNQ9H8Y1 MIR5094-201ENST00000578766 85 ntBASIC3.25□□□□□ -1.89
VRTNQ9H8Y1 AL022345.2-201ENST00000606307 135 ntBASIC3.25□□□□□ -1.89
VRTNQ9H8Y1 MIR8054-201ENST00000620877 86 ntBASIC3.25□□□□□ -1.89
VRTNQ9H8Y1 MIR3914-2-201ENST00000637339 95 ntBASIC3.25□□□□□ -1.89
VRTNQ9H8Y1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRTNQ9H8Y1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 RNU1-109P-201ENST00000383960 147 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 MIR518F-201ENST00000384973 87 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 RNA5SP270-201ENST00000411361 118 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 AC069257.2-201ENST00000441819 155 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 AL161431.1-201ENST00000618966 4205 ntBASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VRTNQ9H8Y1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 Y_RNA.336-201ENST00000365307 109 ntBASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 RNU6-44P-201ENST00000384045 107 ntBASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 MIR597-201ENST00000384968 97 ntBASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 HMGN2P39-201ENST00000398005 273 ntBASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 SNORA28-201ENST00000606769 126 ntBASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 AC134878.1-201ENST00000619901 243 ntBASIC3.23□□□□□ -1.89
VRTNQ9H8Y1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 RNU6-268P-201ENST00000364174 107 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 RNU6-476P-201ENST00000384726 107 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 MIR548O-201ENST00000408583 114 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 HMGN2P3-201ENST00000433603 273 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 HMGN2P5-201ENST00000436882 273 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 STAG3L5P-204ENST00000443759 179 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 RNA5SP341-201ENST00000516261 117 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 SNORA74D-201ENST00000516404 141 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 MIR3200-201ENST00000580767 85 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 AC005000.2-201ENST00000605468 310 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 AC007318.2-201ENST00000620999 243 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 U6.95-201ENST00000636931 70 ntBASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VRTNQ9H8Y1 SNORA80E-201ENST00000384744 137 ntBASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 RPL21P3-201ENST00000395517 478 ntBASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 MIR1283-2-201ENST00000408621 87 ntBASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 Y_RNA.617-201ENST00000410920 90 ntBASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 ICE2P2-201ENST00000483823 2787 ntBASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
VRTNQ9H8Y1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 VTRNA1-1-201ENST00000363120 99 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 Y_RNA.410-201ENST00000383992 113 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 RNU6-1144P-201ENST00000384247 104 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 SNORA40.5-201ENST00000391061 128 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 SNORA11.2-201ENST00000408318 127 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 RNU2-52P-201ENST00000410680 190 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 SNRPGP14-201ENST00000435400 219 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 AL021397.1-201ENST00000451806 248 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 Y_RNA.651-201ENST00000459380 103 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 RNA5SP236-201ENST00000516169 116 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 RNU6-1149P-201ENST00000516810 97 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRTNQ9H8Y1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 SNORD58C-201ENST00000365223 64 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 RN7SKP200-201ENST00000410564 320 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 Y_RNA.630-201ENST00000411370 108 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 HMGN2P32-201ENST00000444648 269 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 RNU7-25P-201ENST00000516544 62 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 MTND5P34-201ENST00000568888 325 ntBASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VRTNQ9H8Y1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 SNORD115-28-201ENST00000363931 81 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 RN7SKP19-201ENST00000516016 252 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 SNORA31.10-201ENST00000516482 106 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 AC107016.2-201ENST00000547968 190 ntBASIC3.18□□□□□ -1.9
VRTNQ9H8Y1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms