Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SUB1P4-201ENST00000566062 339 ntBASIC2.59□□□□□ -1.99
CCDC113Q9H0I3 MIR4744-201ENST00000581563 82 ntBASIC2.59□□□□□ -1.99
CCDC113Q9H0I3 MIR4435-1-201ENST00000582552 80 ntBASIC2.59□□□□□ -1.99
CCDC113Q9H0I3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC113Q9H0I3 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 RNU6-301P-201ENST00000384277 107 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC113Q9H0I3 RN7SKP200-201ENST00000410564 320 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 RNU4-53P-201ENST00000410828 140 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 RNU6-861P-201ENST00000516745 106 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 RNU7-28P-201ENST00000516759 62 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.58□□□□□ -2
CCDC113Q9H0I3 MIR8054-201ENST00000620877 86 ntBASIC2.58□□□□□ -2
CCDC113Q9H0I3 MIR126-201ENST00000362291 85 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 SNORA3.2-201ENST00000408221 125 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 SNRPGP10-201ENST00000432323 225 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.57□□□□□ -2
CCDC113Q9H0I3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
CCDC113Q9H0I3 AC008413.1-201ENST00000511864 177 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 RNU6-453P-201ENST00000516819 85 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.57□□□□□ -2
CCDC113Q9H0I3 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 SNORA28-201ENST00000606769 126 ntBASIC2.57□□□□□ -2
CCDC113Q9H0I3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.56□□□□□ -2
CCDC113Q9H0I3 ZNF702P-202ENST00000434269 1966 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RNA5SP276-201ENST00000362580 94 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 SNORD68-201ENST00000363214 84 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RNU6-112P-201ENST00000363599 104 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 MT-TT-201ENST00000387460 66 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RNA5SP482-201ENST00000391269 118 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.56□□□□□ -2
CCDC113Q9H0I3 RPS27P1-201ENST00000450552 247 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RN7SL429P-201ENST00000479090 223 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RN7SL489P-201ENST00000486185 223 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RN7SL327P-201ENST00000488659 223 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RNA5SP24-201ENST00000516478 95 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RNA5SP481-201ENST00000516814 122 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 AL049861.1-201ENST00000603130 150 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 AL391903.3-201ENST00000612158 163 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 RN7SL853P-201ENST00000617250 223 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 FTX_2.1-201ENST00000618816 94 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 AC064859.1-201ENST00000624741 174 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 MIR203B-201ENST00000636080 86 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.56□□□□□ -2
CCDC113Q9H0I3 AL596028.1-201ENST00000326971 197 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 SNORA63D-201ENST00000364359 132 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 AL606845.1-201ENST00000404881 255 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
CCDC113Q9H0I3 RNU6-209P-201ENST00000384118 107 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 RNY3P5-201ENST00000384127 102 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 RNU6-578P-201ENST00000390980 103 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 RNU6-131P-201ENST00000391144 107 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 RN7SKP101-201ENST00000411376 320 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 AC009310.1-201ENST00000414414 451 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 STAG3L5P-204ENST00000443759 179 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 AL121914.1-201ENST00000450188 156 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 RPL23AP63-201ENST00000498752 471 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 SCARNA8-201ENST00000515924 131 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 AL591926.4-201ENST00000616895 298 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.54□□□□□ -2
CCDC113Q9H0I3 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC113Q9H0I3 RNU6-728P-201ENST00000365375 104 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 AL034345.1-201ENST00000407768 123 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 RNU1-41P-201ENST00000516161 162 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 RNU1-48P-201ENST00000516400 162 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 MIR4287-201ENST00000579398 78 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 MIR3945-201ENST00000581853 98 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
CCDC113Q9H0I3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 U6.106-201ENST00000636360 105 ntBASIC2.53□□□□□ -2
CCDC113Q9H0I3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.555-201ENST00000384673 110 ntBASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 RNA5SP212-201ENST00000391223 107 ntBASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 IGLV3-17-201ENST00000519099 244 ntBASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 uc_338.4-201ENST00000616635 176 ntBASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC113Q9H0I3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNU6-682P-201ENST00000363843 106 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNU6-312P-201ENST00000364629 107 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 SNORA6-201ENST00000384033 151 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 RNU6-296P-201ENST00000384608 107 ntBASIC2.51□□□□□ -2.01
CCDC113Q9H0I3 MIR802-201ENST00000390235 94 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms