Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 Y_RNA.545-201ENST00000384652 105 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 MIR802-201ENST00000390235 94 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 RN7SKP200-201ENST00000410564 320 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 SNRPGP14-201ENST00000435400 219 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 RNU7-23P-201ENST00000459465 62 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 SNORA18.7-201ENST00000516910 131 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 AL358944.1-201ENST00000528537 144 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 AP003484.1-201ENST00000530974 250 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 U2.20-201ENST00000613956 192 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COL25A1Q9BXS0 AP006437.1-201ENST00000641440 3685 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 RNU6-268P-201ENST00000364174 107 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 RNU6-438P-201ENST00000365561 103 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 RNU6-442P-201ENST00000383968 104 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 MIR513A2-201ENST00000385249 127 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 RNA5SP39-201ENST00000411245 120 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 AL022718.1-201ENST00000412004 84 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 CYP4A43P-201ENST00000568156 121 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 MIR3690-201ENST00000580266 75 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 AC091564.4-201ENST00000533934 2194 ntBASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL25A1Q9BXS0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 Y_RNA.299-201ENST00000364973 94 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 RNA5SP167-201ENST00000365461 116 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 MIR489-201ENST00000384923 84 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 MIR7-2-201ENST00000384970 110 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 RNU7-128P-201ENST00000517247 62 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 MIR4644-201ENST00000579929 84 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 SNORD53-201ENST00000579969 78 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL25A1Q9BXS0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 RNU1-15P-201ENST00000353977 144 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 RNA5SP189-201ENST00000364920 115 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 MIR1253-201ENST00000408273 105 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 MIR1289-2-201ENST00000408360 111 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 AL357552.1-201ENST00000445254 415 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 SNORA31.4-201ENST00000516049 129 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 SNORA70.14-201ENST00000516205 110 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 RNU7-99P-201ENST00000516271 62 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 RNU6-341P-201ENST00000516973 96 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 AC096720.1-201ENST00000604441 183 ntBASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL25A1Q9BXS0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 AL627390.1-201ENST00000396055 340 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 RPS15AP28-201ENST00000435088 386 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 AC087499.4-201ENST00000448505 178 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 HMGN2P18-201ENST00000450680 270 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 RPL30P14-201ENST00000482744 348 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 IGLV3-26-201ENST00000520756 302 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 AC020914.4-201ENST00000597690 277 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 U7.4-201ENST00000614961 63 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
COL25A1Q9BXS0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 RNU6-1313P-201ENST00000362622 102 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 SNORD14E-201ENST00000364009 85 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 SNORA71.1-201ENST00000364523 117 ntBASIC3.39□□□□□ -1.87
COL25A1Q9BXS0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms