Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 UBL5P3-201ENST00000475112 231 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 RNU6-1258P-201ENST00000516911 111 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 RNU7-181P-201ENST00000517234 74 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 AC096720.1-201ENST00000604441 183 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 AC027279.3-201ENST00000625055 122 ntBASIC3.5□□□□□ -1.85
USB1Q9BQ65 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USB1Q9BQ65 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.49□□□□□ -1.85
USB1Q9BQ65 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USB1Q9BQ65 SNORD115-2-201ENST00000362842 82 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNA5SP493-201ENST00000364115 91 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 SNORD115-20-201ENST00000365099 82 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNU6-1319P-201ENST00000390855 104 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNU6-220P-201ENST00000390919 107 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNU6-747P-201ENST00000390928 104 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNU6-241P-201ENST00000391148 104 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNU6-177P-201ENST00000411257 104 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.49□□□□□ -1.85
USB1Q9BQ65 AL049873.1-201ENST00000480540 376 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 RNA5SP33-201ENST00000516687 98 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
USB1Q9BQ65 MIR5685-201ENST00000579080 79 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 MIR3152-201ENST00000579801 74 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 SNORA28-201ENST00000606769 126 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 MIR8054-201ENST00000620877 86 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 AL512310.12-203ENST00000640543 90 ntBASIC3.49□□□□□ -1.85
USB1Q9BQ65 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USB1Q9BQ65 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USB1Q9BQ65 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USB1Q9BQ65 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.49□□□□□ -1.85
USB1Q9BQ65 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
USB1Q9BQ65 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USB1Q9BQ65 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 MIRLET7C-201ENST00000362160 84 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 Y_RNA.426-201ENST00000384068 113 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 SNORA26.7-201ENST00000391288 122 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 RNU2-40P-201ENST00000410833 196 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 Z92545.1-201ENST00000411782 234 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 RPPH1-2P-201ENST00000516688 293 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 MIR4668-201ENST00000582284 70 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 MIR548AE2-201ENST00000583456 67 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 AC005000.2-201ENST00000605468 310 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
USB1Q9BQ65 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
USB1Q9BQ65 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.47□□□□□ -1.85
USB1Q9BQ65 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USB1Q9BQ65 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
USB1Q9BQ65 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USB1Q9BQ65 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
USB1Q9BQ65 RNU6-24P-201ENST00000384440 107 ntBASIC3.47□□□□□ -1.85
USB1Q9BQ65 MIR554-201ENST00000384874 96 ntBASIC3.47□□□□□ -1.85
USB1Q9BQ65 Y_RNA.620-201ENST00000411009 88 ntBASIC3.47□□□□□ -1.85
USB1Q9BQ65 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
USB1Q9BQ65 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.47□□□□□ -1.85
USB1Q9BQ65 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
USB1Q9BQ65 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.46□□□□□ -1.86
USB1Q9BQ65 Y_RNA.470-201ENST00000384307 117 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
USB1Q9BQ65 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
USB1Q9BQ65 SNORA11.4-201ENST00000408823 129 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 RPS29P12-201ENST00000460178 152 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 RNA5SP179-201ENST00000517284 121 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 MIR4439-201ENST00000583746 80 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.46□□□□□ -1.86
USB1Q9BQ65 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USB1Q9BQ65 AL442644.1-201ENST00000454390 3105 ntBASIC3.46□□□□□ -1.86
USB1Q9BQ65 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
USB1Q9BQ65 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.45□□□□□ -1.86
USB1Q9BQ65 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USB1Q9BQ65 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
USB1Q9BQ65 RNU6-1313P-201ENST00000362622 102 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 SNORA22.1-201ENST00000362701 134 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 SNORD116-10-201ENST00000363791 102 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 RNY1P4-201ENST00000384595 115 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 RN7SKP27-201ENST00000410684 333 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 RN7SKP192-201ENST00000411291 327 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.45□□□□□ -1.86
USB1Q9BQ65 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.45□□□□□ -1.86
USB1Q9BQ65 AC069257.2-201ENST00000441819 155 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 YPEL5P3-201ENST00000547227 352 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 MIR3169-201ENST00000578032 83 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.45□□□□□ -1.86
USB1Q9BQ65 AC091167.4-201ENST00000605079 184 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 SNORA51-201ENST00000606420 132 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 AC103810.6-201ENST00000606708 136 ntBASIC3.45□□□□□ -1.86
USB1Q9BQ65 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USB1Q9BQ65 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USB1Q9BQ65 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USB1Q9BQ65 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USB1Q9BQ65 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms