Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ARID3AQ99856 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ARID3AQ99856 MIR126-201ENST00000362291 85 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 RNU6-728P-201ENST00000365375 104 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 PCNPP3-201ENST00000393579 471 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 RNA5SP274-201ENST00000410484 108 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 HSPE1P9-201ENST00000440046 311 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 AC245047.8-201ENST00000456455 284 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 RNU6-1219P-201ENST00000516143 112 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 RNU6-861P-201ENST00000516745 106 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 MIR4672-201ENST00000583126 81 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
ARID3AQ99856 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ARID3AQ99856 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ARID3AQ99856 Y_RNA.182-201ENST00000363880 111 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 Y_RNA.412-201ENST00000384001 104 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 RNU6-131P-201ENST00000391144 107 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 AC244636.1-201ENST00000421152 228 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
ARID3AQ99856 NDUFA4P2-201ENST00000489989 244 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 SNORA31.17-201ENST00000516953 127 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 AC022559.1-201ENST00000520905 205 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 AC121758.2-201ENST00000553271 193 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 AC027279.3-201ENST00000625055 122 ntBASIC3.17□□□□□ -1.9
ARID3AQ99856 Y_RNA.441-201ENST00000384123 112 ntBASIC3.16□□□□□ -1.9
ARID3AQ99856 RNA5SP508-201ENST00000411327 119 ntBASIC3.16□□□□□ -1.9
ARID3AQ99856 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.16□□□□□ -1.9
ARID3AQ99856 MIR4709-201ENST00000577272 72 ntBASIC3.16□□□□□ -1.9
ARID3AQ99856 MIR3945-201ENST00000581853 98 ntBASIC3.16□□□□□ -1.9
ARID3AQ99856 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.16□□□□□ -1.9
ARID3AQ99856 AL136360.1-201ENST00000503377 1900 ntBASIC3.16□□□□□ -1.9
ARID3AQ99856 AL596028.1-201ENST00000326971 197 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 SNORA25.6-201ENST00000364121 118 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 SNORA4.2-201ENST00000365313 147 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 Y_RNA.464-201ENST00000384282 110 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 SNORA12.1-201ENST00000390873 148 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 STAG3L5P-204ENST00000443759 179 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 RNA5SP153-201ENST00000516498 76 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 SNORA31.11-201ENST00000516528 139 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.15□□□□□ -1.91
ARID3AQ99856 MIR4431-201ENST00000579990 94 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 AC008507.4-201ENST00000585464 127 ntBASIC3.15□□□□□ -1.91
ARID3AQ99856 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ARID3AQ99856 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ARID3AQ99856 DEFA7P-201ENST00000382676 285 ntBASIC3.14□□□□□ -1.91
ARID3AQ99856 SNORA44-201ENST00000384584 132 ntBASIC3.14□□□□□ -1.91
ARID3AQ99856 MT-TT-201ENST00000387460 66 ntBASIC3.14□□□□□ -1.91
ARID3AQ99856 SNORA26-201ENST00000391286 122 ntBASIC3.14□□□□□ -1.91
ARID3AQ99856 AC097639.2-201ENST00000603159 172 ntBASIC3.14□□□□□ -1.91
ARID3AQ99856 AL513423.1-201ENST00000621695 132 ntBASIC3.14□□□□□ -1.91
ARID3AQ99856 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
ARID3AQ99856 MIRLET7C-201ENST00000362160 84 ntBASIC3.13□□□□□ -1.91
ARID3AQ99856 RNU6-209P-201ENST00000384118 107 ntBASIC3.13□□□□□ -1.91
ARID3AQ99856 Y_RNA.587-201ENST00000391210 103 ntBASIC3.13□□□□□ -1.91
ARID3AQ99856 RNU6-1135P-201ENST00000411083 103 ntBASIC3.13□□□□□ -1.91
ARID3AQ99856 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.13□□□□□ -1.91
ARID3AQ99856 RNU6-1212P-201ENST00000517023 104 ntBASIC3.13□□□□□ -1.91
ARID3AQ99856 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
ARID3AQ99856 AL049861.1-201ENST00000603130 150 ntBASIC3.13□□□□□ -1.91
ARID3AQ99856 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ARID3AQ99856 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ARID3AQ99856 RNU6-484P-201ENST00000384016 107 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 RNU6-424P-201ENST00000384367 105 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 MIR17-201ENST00000385012 84 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
ARID3AQ99856 HMGN2P32-201ENST00000444648 269 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 CYCTP-201ENST00000504253 315 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.12□□□□□ -1.91
ARID3AQ99856 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.12□□□□□ -1.91
ARID3AQ99856 MIR4713-201ENST00000582691 75 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 AL033523.1-201ENST00000605153 153 ntBASIC3.12□□□□□ -1.91
ARID3AQ99856 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ARID3AQ99856 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ARID3AQ99856 RNU6-661P-201ENST00000362409 107 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 Y_RNA.336-201ENST00000365307 109 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 AL139132.1-201ENST00000431587 344 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 SNRPGP8-201ENST00000454064 226 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 RNA5SP233-201ENST00000459153 113 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.11□□□□□ -1.91
ARID3AQ99856 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.11□□□□□ -1.91
ARID3AQ99856 RNU6-1299P-201ENST00000516316 100 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 RNU7-149P-201ENST00000516739 59 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.11□□□□□ -1.91
ARID3AQ99856 MIR6840-201ENST00000611937 71 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.11□□□□□ -1.91
ARID3AQ99856 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ARID3AQ99856 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ARID3AQ99856 RNA5SP276-201ENST00000362580 94 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 SNORD68-201ENST00000363214 84 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 Y_RNA.150-201ENST00000363562 102 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 snoU2-30.1-201ENST00000365012 70 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 PGBD4P5-201ENST00000445958 426 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 MIR4287-201ENST00000579398 78 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 AL137847.3-201ENST00000611521 109 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 AC021506.2-201ENST00000612354 169 ntBASIC3.1□□□□□ -1.91
ARID3AQ99856 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.1□□□□□ -1.91
ARID3AQ99856 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms