Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 MIR449A-201ENST00000362113 91 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 RNU1-22P-201ENST00000363334 158 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 SNORA72-201ENST00000384339 132 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 RNU6-768P-201ENST00000384683 107 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 MTND4LP9-201ENST00000427694 174 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 SNRPGP8-201ENST00000454064 226 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 MIR3117-201ENST00000584034 78 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 AL365222.1-201ENST00000614661 98 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 MIR6844-201ENST00000637122 62 ntBASIC2.32□□□□□ -2.04
PDLIM2Q96JY6 SNORD45.3-201ENST00000363836 72 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 SNORA79-201ENST00000408376 140 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 RNU4-43P-201ENST00000410628 137 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 RN7SKP101-201ENST00000411376 320 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 RPS27P1-201ENST00000450552 247 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 RPS29P21-201ENST00000496272 170 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 AC097462.1-201ENST00000514125 324 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 AL929325.1-201ENST00000603096 117 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 AC012493.3-201ENST00000604494 112 ntBASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
PDLIM2Q96JY6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 RNU6-1290P-201ENST00000362957 109 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 Y_RNA.420-201ENST00000384043 110 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 SNORA22C-201ENST00000384614 134 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 MIR561-201ENST00000385216 97 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 RNU6-220P-201ENST00000390919 107 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 SNORA11.2-201ENST00000408318 127 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 RNU6-971P-201ENST00000516920 106 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 MIR3646-201ENST00000578301 84 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 MIR4513-201ENST00000581077 86 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 AL049861.1-201ENST00000603130 150 ntBASIC2.3□□□□□ -2.04
PDLIM2Q96JY6 RNU4-82P-201ENST00000362443 140 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 Y_RNA.393-201ENST00000383936 102 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RNU6-1080P-201ENST00000383982 107 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 Y_RNA.542-201ENST00000384641 111 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RNU6-1168P-201ENST00000390831 104 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RNU6-588P-201ENST00000410281 105 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 AC060773.1-201ENST00000421698 310 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 HMGN2P34-201ENST00000437647 269 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RPS4XP11-201ENST00000446897 772 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RNU6-1211P-201ENST00000459179 105 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RPL23AP94-201ENST00000512518 302 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RNU6-856P-201ENST00000516959 98 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 RNU6-667P-201ENST00000517186 102 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
PDLIM2Q96JY6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 MIR340-201ENST00000362125 95 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 AC008267.6-201ENST00000441664 139 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 RNU7-197P-201ENST00000458836 62 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 AC092991.1-201ENST00000477176 376 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 RPL23AP91-201ENST00000569211 455 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 MIR378D2-201ENST00000580636 98 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 MIR2681-201ENST00000581814 105 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 AL021707.8-201ENST00000609428 183 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 U6.73-201ENST00000619194 103 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.28□□□□□ -2.04
PDLIM2Q96JY6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.05
PDLIM2Q96JY6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 RNU6-460P-201ENST00000391158 108 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 RNU6-1186P-201ENST00000410429 97 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 RNU6-735P-201ENST00000410612 107 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 CYCSP49-201ENST00000420810 319 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 AC023449.1-201ENST00000454464 154 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 RNA5SP24-201ENST00000516478 95 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 AC011604.1-201ENST00000545978 196 ntBASIC2.27□□□□□ -2.05
PDLIM2Q96JY6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 RNU6-461P-201ENST00000364195 107 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 RNA5SP125-201ENST00000364843 120 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 MIR539-201ENST00000365690 78 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 SNORA75.5-201ENST00000391291 81 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 RNU2-55P-201ENST00000411146 174 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 AC245102.2-201ENST00000448956 180 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 RPS27P21-201ENST00000486977 252 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 AC011406.1-201ENST00000512440 370 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 RNU6-197P-201ENST00000516680 100 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 AC011603.4-201ENST00000611325 277 ntBASIC2.26□□□□□ -2.05
PDLIM2Q96JY6 TUG1_4.1-201ENST00000619464 181 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms