Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SNORA32-201ENST00000384072 121 ntBASIC4.14□□□□□ -1.75
MS4A4AQ96JQ5 IGKV2-26-201ENST00000518305 343 ntBASIC4.14□□□□□ -1.75
MS4A4AQ96JQ5 U7.4-201ENST00000614961 63 ntBASIC4.14□□□□□ -1.75
MS4A4AQ96JQ5 U4.6-201ENST00000621618 127 ntBASIC4.14□□□□□ -1.75
MS4A4AQ96JQ5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.14□□□□□ -1.75
MS4A4AQ96JQ5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MS4A4AQ96JQ5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 AC245060.5-201ENST00000610778 3293 ntBASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 Y_RNA.370-201ENST00000365589 108 ntBASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 RPL23AP48-201ENST00000406913 488 ntBASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 RPS29P29-201ENST00000456396 171 ntBASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 SNORD59.2-201ENST00000516873 68 ntBASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 AC091152.2-201ENST00000591628 2569 ntBASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.13□□□□□ -1.75
MS4A4AQ96JQ5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 Y_RNA.247-201ENST00000364500 92 ntBASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-958P-201ENST00000516995 106 ntBASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 MIR5680-201ENST00000577577 84 ntBASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 AC103810.6-201ENST00000606708 136 ntBASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 MIR8054-201ENST00000620877 86 ntBASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 MIR6717-201ENST00000622747 73 ntBASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MS4A4AQ96JQ5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-315P-201ENST00000362666 107 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-833P-201ENST00000363486 107 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-1244P-201ENST00000363614 108 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-1229P-201ENST00000364295 107 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 SNORA68.1-201ENST00000364537 132 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-590P-201ENST00000365039 107 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 UBL5P1-201ENST00000507979 193 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-1116P-201ENST00000517269 99 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 MIR5004-201ENST00000579078 107 ntBASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MS4A4AQ96JQ5 IPO8P1-201ENST00000455509 3109 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 MIRLET7C-201ENST00000362160 84 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-524P-201ENST00000384270 107 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 Y_RNA.567-201ENST00000384736 106 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 SNORA26.6-201ENST00000391256 115 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 AL606517.2-201ENST00000442855 241 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 AL356274.2-201ENST00000624379 3752 ntBASIC4.1□□□□□ -1.75
MS4A4AQ96JQ5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 SNORD38.2-201ENST00000384470 69 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-1072P-201ENST00000384703 107 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-443P-201ENST00000384780 107 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 RN7SKP111-201ENST00000410349 271 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 AC110741.2-201ENST00000605278 268 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 RNU6-90P-201ENST00000606352 106 ntBASIC4.09□□□□□ -1.75
MS4A4AQ96JQ5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
MS4A4AQ96JQ5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
MS4A4AQ96JQ5 AL035425.3-201ENST00000564206 4996 ntBASIC4.09□□□□□ -1.76
MS4A4AQ96JQ5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 AC093831.2-201ENST00000624393 3427 ntBASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 RNA5SP109-201ENST00000391010 116 ntBASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 MIR548G-201ENST00000408442 89 ntBASIC4.08□□□□□ -1.76
MS4A4AQ96JQ5 RPL31P63-201ENST00000422565 375 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms