Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORD115-20-201ENST00000365099 82 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 RNU6-1083P-201ENST00000384022 107 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 Y_RNA.470-201ENST00000384307 117 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 Y_RNA.494-201ENST00000384432 111 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 RNU7-45P-201ENST00000459460 63 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 SCARNA17.1-201ENST00000516211 143 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 SCARNA17.2-201ENST00000516334 143 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 ZNF861P-201ENST00000588126 639 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 AC020914.4-201ENST00000597690 277 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 SCARNA17.4-201ENST00000614296 143 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRCH3Q96II8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRCH3Q96II8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRCH3Q96II8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.88□□□□□ -1.79
LRCH3Q96II8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRCH3Q96II8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
LRCH3Q96II8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRCH3Q96II8 SNORA54-201ENST00000384281 123 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 Y_RNA.545-201ENST00000384652 105 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 RNU2-37P-201ENST00000410695 177 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 RPS12P2-201ENST00000439728 269 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 AL135938.1-201ENST00000443141 297 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 AC114801.3-201ENST00000510231 177 ntBASIC3.88□□□□□ -1.79
LRCH3Q96II8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.88□□□□□ -1.79
LRCH3Q96II8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRCH3Q96II8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LRCH3Q96II8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRCH3Q96II8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRCH3Q96II8 RNA5SP323-201ENST00000391094 133 ntBASIC3.87□□□□□ -1.79
LRCH3Q96II8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.87□□□□□ -1.79
LRCH3Q96II8 RNU7-94P-201ENST00000459576 63 ntBASIC3.87□□□□□ -1.79
LRCH3Q96II8 RNA5SP33-201ENST00000516687 98 ntBASIC3.87□□□□□ -1.79
LRCH3Q96II8 AC090821.2-201ENST00000523552 176 ntBASIC3.87□□□□□ -1.79
LRCH3Q96II8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRCH3Q96II8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.87□□□□□ -1.79
LRCH3Q96II8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
LRCH3Q96II8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRCH3Q96II8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRCH3Q96II8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRCH3Q96II8 RNU6-1163P-201ENST00000364516 107 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 RNU6-590P-201ENST00000365039 107 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 SNORA8-201ENST00000384574 139 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 MIR3074-201ENST00000384885 81 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.86□□□□□ -1.79
LRCH3Q96II8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.86□□□□□ -1.79
LRCH3Q96II8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.86□□□□□ -1.79
LRCH3Q96II8 MIR486-1-201ENST00000612171 68 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 U4.6-201ENST00000621618 127 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 CTSLP2-204ENST00000629029 392 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.86□□□□□ -1.79
LRCH3Q96II8 AC005336.3-201ENST00000623833 2679 ntBASIC3.86□□□□□ -1.79
LRCH3Q96II8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRCH3Q96II8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRCH3Q96II8 IPO8P1-201ENST00000455509 3109 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.85□□□□□ -1.79
LRCH3Q96II8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRCH3Q96II8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRCH3Q96II8 AC009414.1-201ENST00000427200 443 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 AC004223.1-201ENST00000479840 271 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.85□□□□□ -1.79
LRCH3Q96II8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 MIR3162-201ENST00000581818 82 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 AL353149.1-201ENST00000610667 244 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 uc_338.25-201ENST00000613756 156 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 U7.4-201ENST00000614961 63 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 SEPT14P17-201ENST00000617978 177 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 MIR7843-201ENST00000622274 79 ntBASIC3.85□□□□□ -1.79
LRCH3Q96II8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.85□□□□□ -1.79
LRCH3Q96II8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.85□□□□□ -1.79
LRCH3Q96II8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRCH3Q96II8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRCH3Q96II8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
LRCH3Q96II8 RNU1-105P-201ENST00000363470 161 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 Y_RNA.140-201ENST00000363474 103 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.84□□□□□ -1.79
LRCH3Q96II8 AL161788.1-201ENST00000441805 169 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 AL031183.1-201ENST00000457667 207 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 UBL5P1-201ENST00000507979 193 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 RNA5SP208-201ENST00000516156 78 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 AC103810.6-201ENST00000606708 136 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
LRCH3Q96II8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.84□□□□□ -1.79
LRCH3Q96II8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.79
LRCH3Q96II8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
LRCH3Q96II8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
LRCH3Q96II8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LRCH3Q96II8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
LRCH3Q96II8 AC002546.1-201ENST00000588041 2504 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LRCH3Q96II8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-34-201ENST00000362441 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-12-201ENST00000362583 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-29-201ENST00000362834 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-9-201ENST00000362912 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-21-201ENST00000362963 81 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-14-201ENST00000363090 81 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms