Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP002004.2-201ENST00000531656 154 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC024405.2-202ENST00000532731 184 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AL929325.1-201ENST00000603096 117 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AP003357.1-201ENST00000604497 148 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC242852.1-201ENST00000612151 96 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC244015.1-201ENST00000622301 99 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
HMGB4Q8WW32 RNU6-661P-201ENST00000362409 107 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.14-201ENST00000362415 103 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 RNA5SP247-201ENST00000411181 105 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB4Q8WW32 COX6CP10-201ENST00000416832 224 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 SNORD13-201ENST00000459299 104 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 RNU7-141P-201ENST00000459304 62 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 POLR3GP1-201ENST00000594073 261 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 MIR548AY-201ENST00000617669 107 ntBASIC1.89□□□□□ -2.11
HMGB4Q8WW32 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 SNORA12.1-201ENST00000390873 148 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 U8.19-201ENST00000459095 133 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 RNU2-56P-201ENST00000516826 190 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 AC127455.1-201ENST00000565496 145 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 MIR4498-201ENST00000577599 66 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 AC062037.2-201ENST00000610137 73 ntBASIC1.88□□□□□ -2.11
HMGB4Q8WW32 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMGB4Q8WW32 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HMGB4Q8WW32 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HMGB4Q8WW32 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.352-201ENST00000365439 102 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 RNU6-1031P-201ENST00000384773 107 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGB4Q8WW32 AC025033.1-201ENST00000463883 194 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 RPL39P38-201ENST00000467018 153 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 AC004817.2-201ENST00000561794 651 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 AC134026.1-201ENST00000623249 2239 ntBASIC1.87□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.117-201ENST00000363294 101 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 RNU6-899P-201ENST00000363947 107 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 RNU6-457P-201ENST00000363999 107 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 RNU6-740P-201ENST00000364734 105 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 RNU6-1080P-201ENST00000383982 107 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 RNU6-1289P-201ENST00000384431 106 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HMGB4Q8WW32 MTCO2P33-201ENST00000402100 465 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AL603910.2-201ENST00000407268 136 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 BTF3P11-201ENST00000426582 477 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 FTH1P12-201ENST00000432137 551 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 RNU7-34P-201ENST00000459394 64 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AL049830.1-201ENST00000468034 425 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AC079804.2-201ENST00000490376 200 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AC099513.1-201ENST00000490423 301 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AL162424.1-201ENST00000602325 221 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AL008718.3-201ENST00000610217 321 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AC013791.1-201ENST00000616619 62 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 snoU18.1-201ENST00000629629 71 ntBASIC1.86□□□□□ -2.11
HMGB4Q8WW32 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.86□□□□□ -2.11
HMGB4Q8WW32 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGB4Q8WW32 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGB4Q8WW32 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.350-201ENST00000365409 98 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 MIR548H3-201ENST00000408771 118 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGB4Q8WW32 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 STAG3L5P-204ENST00000443759 179 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 RPL23AP54-201ENST00000495129 419 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 RNU7-28P-201ENST00000516759 62 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 SNORA28-201ENST00000606769 126 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 AC021506.2-201ENST00000612354 169 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
HMGB4Q8WW32 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.82-201ENST00000363000 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.92-201ENST00000363043 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.235-201ENST00000364412 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.265-201ENST00000364677 108 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.306-201ENST00000365015 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.312-201ENST00000365089 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.322-201ENST00000365151 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 RNA5SP482-201ENST00000391269 118 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 AL034345.1-201ENST00000407768 123 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 SNORA36B-201ENST00000410438 131 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.621-201ENST00000411065 96 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.650-201ENST00000459002 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 OR9P1P-201ENST00000496431 281 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 MTND1P19-201ENST00000511780 315 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 251.3 ms