Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 Z83843.1-201ENST00000604070 3685 ntBASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-3Q8TAU0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RNA5SP432-201ENST00000362480 116 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 SNORA5B-201ENST00000363786 132 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-442P-201ENST00000383968 104 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RNA5SP252-201ENST00000391131 119 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RNA5SP144-201ENST00000410846 116 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 AL357552.1-201ENST00000445254 415 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 AC087499.4-201ENST00000448505 178 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RPL23AP63-201ENST00000498752 471 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RNU7-99P-201ENST00000516271 62 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 RNU6-341P-201ENST00000516973 96 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 AC096720.1-201ENST00000604441 183 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 AC145423.2-201ENST00000610631 239 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 U2.20-201ENST00000613956 192 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 AC090517.3-201ENST00000625170 141 ntBASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-3Q8TAU0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 MFSD8-233ENST00000641482 4860 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 AL627390.1-201ENST00000396055 340 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 MIR1253-201ENST00000408273 105 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 RNU4-47P-201ENST00000410876 114 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 RPS15AP28-201ENST00000435088 386 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 SNORA18.7-201ENST00000516910 131 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 AP003484.1-201ENST00000530974 250 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 MIR4474-201ENST00000579189 78 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 MIR4672-201ENST00000583126 81 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 MIR4712-201ENST00000583750 82 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 U4atac.1-201ENST00000618345 95 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 AC095038.3-201ENST00000634439 195 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 AC093010.3-201ENST00000570269 15214 ntBASIC3.97□□□□□ -1.77
NKX2-3Q8TAU0 AP001486.2-201ENST00000561652 5113 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 MIR422A-201ENST00000362286 90 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 U8.15-201ENST00000390947 134 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 SNORA7.5-201ENST00000410672 110 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 AL022718.1-201ENST00000412004 84 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 SNRPGP14-201ENST00000435400 219 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX2-3Q8TAU0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 RNU1-105P-201ENST00000363470 161 ntBASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 Y_RNA.191-201ENST00000363972 113 ntBASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 Y_RNA.545-201ENST00000384652 105 ntBASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 AL512326.2-201ENST00000426359 151 ntBASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 MIR3945-201ENST00000581853 98 ntBASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 HSPE1P19-201ENST00000603327 295 ntBASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.95□□□□□ -1.78
NKX2-3Q8TAU0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 RNU6-268P-201ENST00000364174 107 ntBASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 RN7SKP200-201ENST00000410564 320 ntBASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-3Q8TAU0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 SNORD14E-201ENST00000364009 85 ntBASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 RNA5SP229-201ENST00000410809 99 ntBASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 AL035398.1-201ENST00000430869 322 ntBASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 AC107083.1-201ENST00000439643 279 ntBASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 AC114801.3-201ENST00000510231 177 ntBASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-3Q8TAU0 RNU4-16P-201ENST00000364737 141 ntBASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 RNU6-616P-201ENST00000384353 107 ntBASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 HMGN2P18-201ENST00000450680 270 ntBASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 SNORA4.4-201ENST00000515921 135 ntBASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 RNU6-856P-201ENST00000516959 98 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms