Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RNU4-13P-201ENST00000364019 141 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 Y_RNA.420-201ENST00000384043 110 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 RNU6-136P-201ENST00000384663 107 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 SNORD37.2-201ENST00000391075 66 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 RNU6-735P-201ENST00000410612 107 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 RN7SKP101-201ENST00000411376 320 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 AL357134.1-201ENST00000445848 426 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 AC093259.1-201ENST00000509755 300 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 RNU6-991P-201ENST00000516168 107 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 RNU6-971P-201ENST00000516920 106 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 SNORA48.11-201ENST00000517015 89 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 AL031274.2-201ENST00000599419 203 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 AL021707.8-201ENST00000609428 183 ntBASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHCBP1Q8NEM2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 MIR340-201ENST00000362125 95 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 RNU4-41P-201ENST00000364426 143 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 Y_RNA.542-201ENST00000384641 111 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 AC123900.1-201ENST00000420390 96 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 AC010154.1-201ENST00000425857 269 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 RPS15AP28-201ENST00000435088 386 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 SNRPGP8-201ENST00000454064 226 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 CYP2C59P-201ENST00000457790 269 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 AC092991.1-201ENST00000477176 376 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 CKS1BP2-201ENST00000497342 240 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 AC097462.1-201ENST00000514125 324 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 RNA5SP82-201ENST00000516707 92 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 MIR4438-201ENST00000585271 93 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 AL929325.1-201ENST00000603096 117 ntBASIC2.59□□□□□ -1.99
SHCBP1Q8NEM2 RNY1P11-201ENST00000363759 113 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.218-201ENST00000364218 104 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.393-201ENST00000383936 102 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 SNORA72-201ENST00000384339 132 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.521-201ENST00000384560 114 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 MIR221-201ENST00000385135 110 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.587-201ENST00000391210 103 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 RNA5SP496-201ENST00000391240 109 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 RPS4XP11-201ENST00000446897 772 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 RPS27P1-201ENST00000450552 247 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.58□□□□□ -2
SHCBP1Q8NEM2 MIR3646-201ENST00000578301 84 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 MIR6766-201ENST00000622641 72 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
SHCBP1Q8NEM2 MIR219B-201ENST00000637023 88 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 MIR6844-201ENST00000637122 62 ntBASIC2.58□□□□□ -2
SHCBP1Q8NEM2 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 SNORA64-201ENST00000384674 134 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 AC008267.6-201ENST00000441664 139 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 RNU6-856P-201ENST00000516959 98 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 RNU7-172P-201ENST00000517125 64 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 U2.20-201ENST00000613956 192 ntBASIC2.57□□□□□ -2
SHCBP1Q8NEM2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SHCBP1Q8NEM2 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 RNA5SP99-201ENST00000364020 114 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.261-201ENST00000364631 102 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 RNU6-460P-201ENST00000391158 108 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 AL512604.1-201ENST00000404812 257 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 RNU6-588P-201ENST00000410281 105 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 CYCSP49-201ENST00000420810 319 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 AC060773.1-201ENST00000421698 310 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 AC245102.2-201ENST00000448956 180 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 AL049861.1-201ENST00000603130 150 ntBASIC2.56□□□□□ -2
SHCBP1Q8NEM2 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHCBP1Q8NEM2 RNU6-484P-201ENST00000384016 107 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHCBP1Q8NEM2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHCBP1Q8NEM2 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 RNU6-1211P-201ENST00000459179 105 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 SNORA4.4-201ENST00000515921 135 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 RNU6-1234P-201ENST00000516877 103 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 AL355297.2-201ENST00000604792 129 ntBASIC2.55□□□□□ -2
SHCBP1Q8NEM2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
SHCBP1Q8NEM2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.71-201ENST00000362892 104 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 Y_RNA.251-201ENST00000364551 99 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU6-1082P-201ENST00000364574 107 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 SNORD50B-201ENST00000364995 70 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 SNORA75.5-201ENST00000391291 81 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU2-63P-201ENST00000410792 194 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 AL603825.1-201ENST00000438481 80 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU6-197P-201ENST00000516680 100 ntBASIC2.54□□□□□ -2
SHCBP1Q8NEM2 RNU6-548P-201ENST00000517083 115 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms