Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.686-201ENST00000516548 134 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-63P-201ENST00000516690 95 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RNU7-116P-201ENST00000516940 62 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AC011603.4-201ENST00000611325 277 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIMC1Q8NDZ2 SNORD45.3-201ENST00000363836 72 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 Y_RNA.251-201ENST00000364551 99 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 SNORD23.1-201ENST00000408212 104 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 RNU6-437P-201ENST00000459408 95 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 RNU4-57P-201ENST00000515980 135 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 RNU1-41P-201ENST00000516161 162 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 RNU1-48P-201ENST00000516400 162 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 PRELID2P1-201ENST00000552837 301 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 AP001340.1-201ENST00000624405 217 ntBASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SIMC1Q8NDZ2 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.02
SIMC1Q8NDZ2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SIMC1Q8NDZ2 U8.2-201ENST00000363156 134 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-674P-201ENST00000363831 107 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-418P-201ENST00000384035 107 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-44P-201ENST00000384045 107 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNA5SP465-201ENST00000391195 109 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 Y_RNA.587-201ENST00000391210 103 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RN7SKP101-201ENST00000411376 320 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AC123900.1-201ENST00000420390 96 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 CYCSP49-201ENST00000420810 319 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AL035461.1-201ENST00000421490 332 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AC016925.1-201ENST00000458303 298 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AC010531.2-201ENST00000465012 153 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-948P-201ENST00000516374 107 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 RNU2-56P-201ENST00000516826 190 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AC025647.1-201ENST00000517879 253 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
SIMC1Q8NDZ2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 CENPCP1-201ENST00000533085 2578 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-1082P-201ENST00000364574 107 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-117P-201ENST00000365415 107 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RNA5SP496-201ENST00000391240 109 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 SNORA75.5-201ENST00000391291 81 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RNA5SP511-201ENST00000410487 115 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RN7SKP192-201ENST00000411291 327 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-659P-201ENST00000516454 104 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 AP001328.1-201ENST00000528550 176 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 AC015720.1-201ENST00000565251 277 ntBASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIMC1Q8NDZ2 RNU4-41P-201ENST00000364426 143 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-1325P-201ENST00000364905 105 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-597P-201ENST00000365620 102 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AL512604.1-201ENST00000404812 257 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AC016909.1-201ENST00000415916 166 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AC096725.1-201ENST00000514266 313 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-919P-201ENST00000516731 104 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 SNORA31.25-201ENST00000517242 134 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 SNORD53-201ENST00000579969 78 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 MIR378D2-201ENST00000580636 98 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AC120024.3-201ENST00000603167 156 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AL021707.8-201ENST00000609428 183 ntBASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SIMC1Q8NDZ2 AC009487.4-201ENST00000624969 3585 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-136P-201ENST00000384663 107 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 MIR1262-201ENST00000408276 93 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 SNORA79-201ENST00000408376 140 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-498P-201ENST00000459468 107 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RNU2-34P-201ENST00000516534 121 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 U7.2-201ENST00000607576 63 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 AC006435.5-201ENST00000624486 112 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIMC1Q8NDZ2 RNU4-13P-201ENST00000364019 141 ntBASIC2.36□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-915P-201ENST00000364943 103 ntBASIC2.36□□□□□ -2.03
SIMC1Q8NDZ2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms