Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP48Q86UV5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP48Q86UV5 AC010332.2-201ENST00000613083 1904 ntBASIC3.05□□□□□ -1.92
USP48Q86UV5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP48Q86UV5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP48Q86UV5 SNORA72-201ENST00000384339 132 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 RNU6-735P-201ENST00000410612 107 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 MTND4LP9-201ENST00000427694 174 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 AC018634.1-201ENST00000437554 401 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 RNA5SP137-201ENST00000516833 135 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.04□□□□□ -1.92
USP48Q86UV5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.04□□□□□ -1.92
USP48Q86UV5 AC073413.2-201ENST00000604332 360 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 AC010297.1-201ENST00000623948 149 ntBASIC3.04□□□□□ -1.92
USP48Q86UV5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP48Q86UV5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.04□□□□□ -1.92
USP48Q86UV5 ZNF702P-202ENST00000434269 1966 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP48Q86UV5 DEFA7P-201ENST00000382676 285 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 SNORA20-201ENST00000384662 132 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 MIR520G-201ENST00000385064 90 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 RNA5SP467-201ENST00000391274 118 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 AL606845.1-201ENST00000404881 255 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.03□□□□□ -1.92
USP48Q86UV5 CST2P1-201ENST00000425770 87 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.03□□□□□ -1.92
USP48Q86UV5 RNU6-437P-201ENST00000459408 95 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 AC107027.2-201ENST00000512197 115 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 RNU1-142P-201ENST00000516682 145 ntBASIC3.03□□□□□ -1.92
USP48Q86UV5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP48Q86UV5 VTRNA1-1-201ENST00000363120 99 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 Y_RNA.218-201ENST00000364218 104 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 RNU6-1154P-201ENST00000391001 104 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 RNA5SP323-201ENST00000391094 133 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 AL117342.1-201ENST00000404861 406 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 SNORA25.12-201ENST00000516202 82 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 RNU6-62P-201ENST00000516526 102 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.02□□□□□ -1.93
USP48Q86UV5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP48Q86UV5 AC245060.5-201ENST00000610778 3293 ntBASIC3.02□□□□□ -1.93
USP48Q86UV5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP48Q86UV5 RNU1-58P-201ENST00000362413 163 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 RNU6-1228P-201ENST00000391014 107 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 AC006461.1-201ENST00000412637 326 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 RPS4XP11-201ENST00000446897 772 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 AL121914.1-201ENST00000450188 156 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 RNU7-128P-201ENST00000517247 62 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 AC024995.1-201ENST00000523014 93 ntBASIC3.01□□□□□ -1.93
USP48Q86UV5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP48Q86UV5 Z82195.2-201ENST00000612348 18351 ntBASIC3□□□□□ -1.93
USP48Q86UV5 MIR6073-201ENST00000352083 89 ntBASIC3□□□□□ -1.93
USP48Q86UV5 RNU6-674P-201ENST00000363831 107 ntBASIC3□□□□□ -1.93
USP48Q86UV5 Y_RNA.261-201ENST00000364631 102 ntBASIC3□□□□□ -1.93
USP48Q86UV5 Y_RNA.542-201ENST00000384641 111 ntBASIC3□□□□□ -1.93
USP48Q86UV5 MIR15B-201ENST00000385045 98 ntBASIC3□□□□□ -1.93
USP48Q86UV5 5S_rRNA.2-201ENST00000391293 112 ntBASIC3□□□□□ -1.93
USP48Q86UV5 RNA5SP181-201ENST00000410246 98 ntBASIC3□□□□□ -1.93
USP48Q86UV5 AL356320.1-201ENST00000429616 163 ntBASIC3□□□□□ -1.93
USP48Q86UV5 SNRPGP8-201ENST00000454064 226 ntBASIC3□□□□□ -1.93
USP48Q86UV5 RNU6-313P-201ENST00000516317 112 ntBASIC3□□□□□ -1.93
USP48Q86UV5 RNU6-971P-201ENST00000516920 106 ntBASIC3□□□□□ -1.93
USP48Q86UV5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3□□□□□ -1.93
USP48Q86UV5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
USP48Q86UV5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
USP48Q86UV5 SNORD114-1-201ENST00000362705 72 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 RNU6-862P-201ENST00000362804 105 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 Y_RNA.337-201ENST00000365312 102 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 RNU6-643P-201ENST00000384018 107 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 SNORA11.4-201ENST00000408823 129 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 AC092991.1-201ENST00000477176 376 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 AC011604.1-201ENST00000545978 196 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.99□□□□□ -1.93
USP48Q86UV5 MIR1273D-201ENST00000577266 86 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 AC005786.1-201ENST00000588553 154 ntBASIC2.99□□□□□ -1.93
USP48Q86UV5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP48Q86UV5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP48Q86UV5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP48Q86UV5 RNU6-768P-201ENST00000384683 107 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 SNORA40-201ENST00000388090 126 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 RNA5SP247-201ENST00000411181 105 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 BX510359.4-201ENST00000423750 193 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.98□□□□□ -1.93
USP48Q86UV5 SUMO1P4-201ENST00000429430 302 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USP48Q86UV5 AC234781.5-201ENST00000508429 271 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 AL353997.5-201ENST00000618886 171 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 U6.108-201ENST00000637764 58 ntBASIC2.98□□□□□ -1.93
USP48Q86UV5 Y_RNA.71-201ENST00000362892 104 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 SNORA33-201ENST00000363664 130 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 SNORA8-201ENST00000384574 139 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 AL512604.1-201ENST00000404812 257 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 RNU4-43P-201ENST00000410628 137 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 RPL30P13-201ENST00000418873 348 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 AC046143.2-201ENST00000609789 160 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 MIR6079-201ENST00000635807 62 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 AC018630.2-201ENST00000534866 2403 ntBASIC2.97□□□□□ -1.93
USP48Q86UV5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms