Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP112-201ENST00000515937 99 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 RNU7-25P-201ENST00000516544 62 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 MIR4305-201ENST00000583252 102 ntBASIC2.83□□□□□ -1.96
ATG4DQ86TL0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ATG4DQ86TL0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
ATG4DQ86TL0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4DQ86TL0 MIR802-201ENST00000390235 94 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4DQ86TL0 AC060773.1-201ENST00000421698 310 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 AL031183.1-201ENST00000457667 207 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 RNU1-131P-201ENST00000458943 161 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 AC113410.1-201ENST00000505029 247 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 RNU7-128P-201ENST00000517247 62 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4DQ86TL0 MIR5004-201ENST00000579078 107 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4DQ86TL0 ICE2P2-201ENST00000483823 2787 ntBASIC2.82□□□□□ -1.96
ATG4DQ86TL0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 RNU4-16P-201ENST00000364737 141 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 SNORA4.2-201ENST00000365313 147 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 MIR767-201ENST00000390228 109 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 RPS15AP28-201ENST00000435088 386 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 UQCRHP3-201ENST00000451503 251 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 AC091826.1-201ENST00000514065 313 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 SNORA4.4-201ENST00000515921 135 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 RNA5SP341-201ENST00000516261 117 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 AC002984.1-201ENST00000591692 448 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 AL513534.2-201ENST00000603836 250 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 MIR622-201ENST00000638396 96 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 AC092435.3-201ENST00000565538 3654 ntBASIC2.81□□□□□ -1.96
ATG4DQ86TL0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ATG4DQ86TL0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SNORD115-28-201ENST00000363931 81 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SNORD15B-201ENST00000384714 146 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 MIR522-201ENST00000385071 87 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 RNA5SP467-201ENST00000391274 118 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 RPL21P3-201ENST00000395517 478 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 RNU7-99P-201ENST00000516271 62 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 UBL5P2-201ENST00000583788 219 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 MIR6079-201ENST00000635807 62 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 MIR1255B1-201ENST00000636325 63 ntBASIC2.8□□□□□ -1.96
ATG4DQ86TL0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4DQ86TL0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4DQ86TL0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AC018630.2-201ENST00000534866 2403 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 RNU6-170P-201ENST00000362832 104 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.313-201ENST00000365095 103 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.351-201ENST00000365436 96 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.440-201ENST00000384120 114 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 RNU6-402P-201ENST00000410678 103 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 RNU6-938P-201ENST00000411285 103 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AC009414.1-201ENST00000427200 443 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 FTH1P12-201ENST00000432137 551 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 RN7SL20P-201ENST00000488827 297 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 RNU6-856P-201ENST00000516959 98 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AC087685.1-201ENST00000587507 141 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 AC087741.2-201ENST00000619415 172 ntBASIC2.79□□□□□ -1.96
ATG4DQ86TL0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATG4DQ86TL0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4DQ86TL0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
ATG4DQ86TL0 AC073325.2-201ENST00000339545 159 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 MIR577-201ENST00000385196 96 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 SNORD67-201ENST00000390833 111 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 BTF3P4-201ENST00000418852 495 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 AC004941.2-201ENST00000427009 228 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 AL445646.1-201ENST00000431784 216 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 RNU6-991P-201ENST00000516168 107 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 RNU6-267P-201ENST00000516714 103 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.78□□□□□ -1.96
ATG4DQ86TL0 AC091544.4-201ENST00000555268 342 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 Y_RNA.773-201ENST00000607168 90 ntBASIC2.78□□□□□ -1.96
ATG4DQ86TL0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms