Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
NLRC3Q7RTR2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.67□□□□□ -1.98
NLRC3Q7RTR2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NLRC3Q7RTR2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
NLRC3Q7RTR2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NLRC3Q7RTR2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 Y_RNA.52-201ENST00000362760 96 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 MIR518A2-201ENST00000384966 87 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 RNA5SP465-201ENST00000391195 109 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 STAG3L5P-204ENST00000443759 179 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 RN7SKP179-201ENST00000516126 217 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 RNU6-659P-201ENST00000516454 104 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 RN7SKP57-201ENST00000517248 293 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 AC090049.2-201ENST00000550377 109 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 MIR4446-201ENST00000578505 67 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 AL161756.2-201ENST00000604597 246 ntBASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NLRC3Q7RTR2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.65□□□□□ -1.98
NLRC3Q7RTR2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 SNORD15B-201ENST00000384714 146 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 RNU6-440P-201ENST00000390882 105 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 AL603914.1-201ENST00000401964 204 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 AL590004.2-201ENST00000404787 371 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 HMGN2P3-201ENST00000433603 273 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 HMGN2P5-201ENST00000436882 273 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 RN7SL504P-201ENST00000494496 287 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 Y_RNA.690-201ENST00000516603 95 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 YPEL5P2-201ENST00000605553 359 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 SNORA28-201ENST00000606769 126 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 AL136360.1-201ENST00000503377 1900 ntBASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NLRC3Q7RTR2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 RNU6-235P-201ENST00000362644 107 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 Y_RNA.273-201ENST00000364703 102 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 MIR548A2-201ENST00000384956 97 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 MIR891A-201ENST00000401237 79 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 RNU7-107P-201ENST00000459121 61 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 SNORD45.4-201ENST00000516629 73 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 RNU2-60P-201ENST00000517290 128 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 MIR2682-201ENST00000580305 110 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 MIR8057-201ENST00000620957 69 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 MIR622-201ENST00000638396 96 ntBASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.64□□□□□ -1.99
NLRC3Q7RTR2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 HMGN2P39-201ENST00000398005 273 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 MIR548O-201ENST00000408583 114 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 RPS29P6-201ENST00000438196 145 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 AC005000.2-201ENST00000605468 310 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 AC006441.5-201ENST00000612680 209 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 AL162274.2-201ENST00000614406 332 ntBASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.63□□□□□ -1.99
NLRC3Q7RTR2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 SNORA9-201ENST00000384215 133 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 SNORA7.4-201ENST00000384249 137 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 MIR518F-201ENST00000384973 87 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 MTATP6P21-201ENST00000440681 189 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 HMGN2P32-201ENST00000444648 269 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 SNORA74D-201ENST00000516404 141 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 MIR3121-201ENST00000579680 77 ntBASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NLRC3Q7RTR2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 MIR422A-201ENST00000362286 90 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 Y_RNA.114-201ENST00000363265 113 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 Y_RNA.336-201ENST00000365307 109 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 SNORA80E-201ENST00000384744 137 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 RNA5SP274-201ENST00000410484 108 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 RNA5SP270-201ENST00000411361 118 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 AL158823.1-201ENST00000418441 478 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 AF228730.3-201ENST00000436691 102 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 RN7SL633P-201ENST00000488974 297 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 RNU5E-3P-201ENST00000515913 68 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 SNORA31.10-201ENST00000516482 106 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.61□□□□□ -1.99
NLRC3Q7RTR2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms