Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 HMGN2P38-201ENST00000423806 265 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 AC245047.4-201ENST00000433189 144 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.662-201ENST00000516028 97 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 MIR5007-201ENST00000583098 95 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 U6.106-201ENST00000636360 105 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-103P-201ENST00000363686 107 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.180-201ENST00000363867 113 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.240-201ENST00000364469 95 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.412-201ENST00000384001 104 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 RNA5SP450-201ENST00000411206 102 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.797-201ENST00000515977 94 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 MIR4744-201ENST00000581563 82 ntBASIC2.03□□□□□ -2.08
PTCHD4Q6ZW05 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 SNORA1B-201ENST00000362535 133 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.796-201ENST00000364268 102 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.799-201ENST00000364992 102 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-301P-201ENST00000384277 107 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 MIR562-201ENST00000384894 95 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 AC245047.3-201ENST00000429428 127 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RPS27P1-201ENST00000450552 247 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 RPL23AP91-201ENST00000569211 455 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 AC108706.1-201ENST00000611053 297 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 AL391903.3-201ENST00000612158 163 ntBASIC2.02□□□□□ -2.09
PTCHD4Q6ZW05 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.75-201ENST00000362927 97 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-1209P-201ENST00000363655 107 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 SNORA67.4-201ENST00000384688 142 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-578P-201ENST00000390980 103 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RNA5SP496-201ENST00000391240 109 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AL606845.1-201ENST00000404881 255 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RN7SKP101-201ENST00000411376 320 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AL158823.1-201ENST00000418441 478 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 RNU2-56P-201ENST00000516826 190 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AL358944.1-201ENST00000528537 144 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AP002004.2-201ENST00000531656 154 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 MRPS18CP4-201ENST00000535821 231 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 MIR2681-201ENST00000581814 105 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AL021707.8-201ENST00000609428 183 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 CTSLP2-204ENST00000629029 392 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
PTCHD4Q6ZW05 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.253-201ENST00000364562 112 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-275P-201ENST00000364910 107 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 AL049830.1-201ENST00000468034 425 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 AC109810.1-201ENST00000534066 224 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 SUB1P4-201ENST00000566062 339 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 AL049861.1-201ENST00000603130 150 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 JPX_2.1-201ENST00000614161 69 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
PTCHD4Q6ZW05 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
PTCHD4Q6ZW05 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2□□□□□ -2.09
PTCHD4Q6ZW05 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 RNA5SP289-201ENST00000362332 137 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-1228P-201ENST00000391014 107 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.587-201ENST00000391210 103 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 MTND2P29-201ENST00000438595 412 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 SNORD11-201ENST00000459124 84 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-561P-201ENST00000516222 102 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 MIR8054-201ENST00000620877 86 ntBASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTCHD4Q6ZW05 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 SNORA63D-201ENST00000364359 132 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 MIR221-201ENST00000385135 110 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 RNU5E-9P-201ENST00000411164 104 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 SNRPGP10-201ENST00000432323 225 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 RNA5SP281-201ENST00000516504 135 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms