Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-1241P-201ENST00000384536 107 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 MIR1267-201ENST00000408723 78 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 RN7SKP192-201ENST00000411291 327 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 RPL32P34-201ENST00000486380 400 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 RNA5SP164-201ENST00000516533 110 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 RNU6-586P-201ENST00000517265 104 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 MIR5187-201ENST00000583479 76 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 MIR4727-201ENST00000622232 55 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 MIR6717-201ENST00000622747 73 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 CTSLP2-204ENST00000629029 392 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 MIR338-201ENST00000636369 67 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VARS2Q5ST30 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
VARS2Q5ST30 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
VARS2Q5ST30 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
VARS2Q5ST30 RNA5SP138-201ENST00000365098 114 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 RNU6-198P-201ENST00000384258 104 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 RNA5SP306-201ENST00000411087 107 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 AC234781.5-201ENST00000508429 271 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 DNAJC19P9-201ENST00000555084 351 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
VARS2Q5ST30 ZNF962P-201ENST00000443465 3140 ntBASIC4.06□□□□□ -1.76
VARS2Q5ST30 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
VARS2Q5ST30 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VARS2Q5ST30 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.06□□□□□ -1.76
VARS2Q5ST30 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARS2Q5ST30 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARS2Q5ST30 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARS2Q5ST30 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VARS2Q5ST30 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARS2Q5ST30 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VARS2Q5ST30 AL035423.1-201ENST00000420331 213 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 AC074348.1-201ENST00000426503 132 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 RNU7-181P-201ENST00000517234 74 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARS2Q5ST30 AC091152.2-201ENST00000591628 2569 ntBASIC4.05□□□□□ -1.76
VARS2Q5ST30 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VARS2Q5ST30 LINC02471-203ENST00000641941 4752 ntBASIC4.04□□□□□ -1.76
VARS2Q5ST30 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VARS2Q5ST30 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 RNA5SP482-201ENST00000391269 118 ntBASIC4.04□□□□□ -1.76
VARS2Q5ST30 RNU2-63P-201ENST00000410792 194 ntBASIC4.04□□□□□ -1.76
VARS2Q5ST30 CYCSP35-201ENST00000451978 304 ntBASIC4.04□□□□□ -1.76
VARS2Q5ST30 MTND5P40-201ENST00000559945 246 ntBASIC4.04□□□□□ -1.76
VARS2Q5ST30 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 AC244505.7-201ENST00000599675 272 ntBASIC4.04□□□□□ -1.76
VARS2Q5ST30 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VARS2Q5ST30 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
VARS2Q5ST30 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VARS2Q5ST30 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.03□□□□□ -1.76
VARS2Q5ST30 RNU6-424P-201ENST00000384367 105 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 MIR154-201ENST00000385243 84 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 CST9LP2-201ENST00000437612 320 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 AC079150.2-201ENST00000443733 78 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 SNORA31.1-201ENST00000515993 133 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 SNORA31.5-201ENST00000516190 133 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 RNU7-53P-201ENST00000516705 60 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 RNU6-303P-201ENST00000517091 106 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 RNU7-35P-201ENST00000517174 62 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 MIR3690-201ENST00000580266 75 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VARS2Q5ST30 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
VARS2Q5ST30 MAPK10-373ENST00000641983 6772 ntBASIC4.03□□□□□ -1.76
VARS2Q5ST30 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VARS2Q5ST30 SNORA70.7-201ENST00000384159 133 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 SNORD77.2-201ENST00000391045 68 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 RNU7-85P-201ENST00000458851 63 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 SEM1P1-201ENST00000506694 209 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 RNA5SP112-201ENST00000515937 99 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 Vault.1-201ENST00000516474 102 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 SNORA62.6-201ENST00000606322 83 ntBASIC4.02□□□□□ -1.77
VARS2Q5ST30 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VARS2Q5ST30 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.02□□□□□ -1.77
VARS2Q5ST30 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VARS2Q5ST30 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.01□□□□□ -1.77
VARS2Q5ST30 Y_RNA.264-201ENST00000364665 102 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 RNA5SP51-201ENST00000364750 119 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 RNU6-342P-201ENST00000384521 104 ntBASIC4.01□□□□□ -1.77
VARS2Q5ST30 RNU6-1321P-201ENST00000390905 107 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms