Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 CST9LP2-201ENST00000437612 320 ntBASIC5.57□□□□□ -1.52
NCBP3Q53F19 AC093850.1-201ENST00000454121 251 ntBASIC5.57□□□□□ -1.52
NCBP3Q53F19 RNU6-557P-201ENST00000516842 110 ntBASIC5.57□□□□□ -1.52
NCBP3Q53F19 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 CYP4A43P-201ENST00000568156 121 ntBASIC5.57□□□□□ -1.52
NCBP3Q53F19 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NCBP3Q53F19 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NCBP3Q53F19 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.57□□□□□ -1.52
NCBP3Q53F19 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NCBP3Q53F19 SNORA26.7-201ENST00000391288 122 ntBASIC5.56□□□□□ -1.52
NCBP3Q53F19 SNORD123-201ENST00000459473 70 ntBASIC5.56□□□□□ -1.52
NCBP3Q53F19 RNU6-1015P-201ENST00000517121 99 ntBASIC5.56□□□□□ -1.52
NCBP3Q53F19 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.56□□□□□ -1.52
NCBP3Q53F19 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NCBP3Q53F19 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NCBP3Q53F19 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
NCBP3Q53F19 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NCBP3Q53F19 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NCBP3Q53F19 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NCBP3Q53F19 MIR7151-201ENST00000617477 60 ntBASIC5.55□□□□□ -1.52
NCBP3Q53F19 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC5.55□□□□□ -1.52
NCBP3Q53F19 AP001362.1-201ENST00000625165 124 ntBASIC5.55□□□□□ -1.52
NCBP3Q53F19 MIR6830-201ENST00000636015 70 ntBASIC5.55□□□□□ -1.52
NCBP3Q53F19 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.55□□□□□ -1.52
NCBP3Q53F19 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCBP3Q53F19 MAPK10-253ENST00000641010 4072 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NCBP3Q53F19 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 Y_RNA.354-201ENST00000365448 111 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 MIR1265-201ENST00000408444 86 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 HLA-N-201ENST00000437516 135 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 MIR3138-201ENST00000585238 82 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 MIR8055-201ENST00000610739 97 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 MIR8059-201ENST00000620427 81 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 MIR8065-201ENST00000620577 100 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 AC022513.1-201ENST00000624512 117 ntBASIC5.54□□□□□ -1.52
NCBP3Q53F19 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NCBP3Q53F19 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCBP3Q53F19 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NCBP3Q53F19 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NCBP3Q53F19 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.53□□□□□ -1.52
NCBP3Q53F19 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
NCBP3Q53F19 SNORA63.2-201ENST00000362603 126 ntBASIC5.53□□□□□ -1.52
NCBP3Q53F19 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.53□□□□□ -1.52
NCBP3Q53F19 RNA5SP519-201ENST00000516480 119 ntBASIC5.53□□□□□ -1.52
NCBP3Q53F19 AC114781.5-201ENST00000615297 108 ntBASIC5.53□□□□□ -1.52
NCBP3Q53F19 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCBP3Q53F19 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
NCBP3Q53F19 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NCBP3Q53F19 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NCBP3Q53F19 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
NCBP3Q53F19 RNU6-161P-201ENST00000363051 106 ntBASIC5.52□□□□□ -1.53
NCBP3Q53F19 RNA5SP133-201ENST00000363368 119 ntBASIC5.52□□□□□ -1.53
NCBP3Q53F19 Y_RNA.508-201ENST00000384502 114 ntBASIC5.52□□□□□ -1.53
NCBP3Q53F19 MIR3186-201ENST00000577404 85 ntBASIC5.52□□□□□ -1.53
NCBP3Q53F19 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC5.52□□□□□ -1.53
NCBP3Q53F19 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NCBP3Q53F19 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NCBP3Q53F19 AC139713.2-215ENST00000641428 5037 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC5.51□□□□□ -1.53
NCBP3Q53F19 RNU6-1019P-201ENST00000364424 107 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 RNU6-1067P-201ENST00000384752 107 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 RNU6-220P-201ENST00000390919 107 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 AC003685.2-201ENST00000422795 395 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 snoU13.16-201ENST00000459350 104 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 RNU6-448P-201ENST00000517052 107 ntBASIC5.51□□□□□ -1.53
NCBP3Q53F19 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NCBP3Q53F19 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NCBP3Q53F19 AL355596.1-201ENST00000565399 3996 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCBP3Q53F19 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NCBP3Q53F19 SCN1A-220ENST00000641603 12506 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 MIR448-201ENST00000362131 111 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 SNORA37-201ENST00000384504 129 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 AC109327.1-201ENST00000471666 403 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 AC069114.2-201ENST00000604699 304 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 MIR8066-201ENST00000617280 78 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NCBP3Q53F19 Z82217.1-201ENST00000625157 8149 ntBASIC5.5□□□□□ -1.53
NCBP3Q53F19 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCBP3Q53F19 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NCBP3Q53F19 Y_RNA.537-201ENST00000384626 109 ntBASIC5.49□□□□□ -1.53
NCBP3Q53F19 AC026402.1-201ENST00000513642 170 ntBASIC5.49□□□□□ -1.53
NCBP3Q53F19 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCBP3Q53F19 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NCBP3Q53F19 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NCBP3Q53F19 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NCBP3Q53F19 SNORD115-3-201ENST00000363100 82 ntBASIC5.48□□□□□ -1.53
NCBP3Q53F19 AL133547.1-201ENST00000448546 220 ntBASIC5.48□□□□□ -1.53
NCBP3Q53F19 RNU6-1108P-201ENST00000516308 104 ntBASIC5.48□□□□□ -1.53
NCBP3Q53F19 IFITM8P-201ENST00000522529 394 ntBASIC5.48□□□□□ -1.53
NCBP3Q53F19 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms