Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL512310.12-203ENST00000640543 90 ntBASIC3.75□□□□□ -1.81
CTC1Q2NKJ3 AC091152.2-201ENST00000591628 2569 ntBASIC3.75□□□□□ -1.81
CTC1Q2NKJ3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CTC1Q2NKJ3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 RN7SKP111-201ENST00000410349 271 ntBASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 RNU6-1186P-201ENST00000410429 97 ntBASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 AC097463.2-201ENST00000421074 142 ntBASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 AP003484.1-201ENST00000530974 250 ntBASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 AC078899.2-201ENST00000595282 212 ntBASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 RNU6-86P-201ENST00000606534 107 ntBASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CTC1Q2NKJ3 AC009487.4-201ENST00000624969 3585 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 SNORA80A-201ENST00000363922 136 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 Y_RNA.267-201ENST00000364679 109 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 RNU6-438P-201ENST00000365561 103 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 RN7SL429P-201ENST00000479090 223 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 RN7SL489P-201ENST00000486185 223 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 RN7SL327P-201ENST00000488659 223 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 AC093259.1-201ENST00000509755 300 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 IGKV2-26-201ENST00000518305 343 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 RN7SL853P-201ENST00000617250 223 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 Y_RNA.788-201ENST00000622394 112 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 CEP170P1-201ENST00000502249 4587 ntBASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTC1Q2NKJ3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 AC099677.2-201ENST00000436385 175 ntBASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 RNA5SP112-201ENST00000515937 99 ntBASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 MIR4439-201ENST00000583746 80 ntBASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 AC006441.5-201ENST00000612680 209 ntBASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTC1Q2NKJ3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
CTC1Q2NKJ3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 MIR1253-201ENST00000408273 105 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 AC093729.1-201ENST00000513074 128 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 RNU6-539P-201ENST00000516665 103 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 RNU6-711P-201ENST00000517255 106 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 MIR4765-201ENST00000585007 77 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 U4.6-201ENST00000621618 127 ntBASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.82
CTC1Q2NKJ3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 AC008264.2-201ENST00000610193 3731 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 SNORA1.1-201ENST00000364671 133 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 MIR522-201ENST00000385071 87 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 COTL1P1-201ENST00000422309 375 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 Z98742.2-201ENST00000431564 187 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 RPS12P2-201ENST00000439728 269 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 AC090115.4-201ENST00000609970 188 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 AP003355.3-201ENST00000623465 114 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 AC006386.2-201ENST00000624491 75 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 AC012005.1-201ENST00000624575 75 ntBASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTC1Q2NKJ3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 RNU6-1313P-201ENST00000362622 102 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 RNU6-268P-201ENST00000364174 107 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 Y_RNA.247-201ENST00000364500 92 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 RNU6-442P-201ENST00000383968 104 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC090844.1-201ENST00000422019 156 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 FTH1P12-201ENST00000432137 551 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC025750.2-201ENST00000442609 450 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC103810.1-201ENST00000579873 453 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 AC008163.1-202ENST00000636004 2889 ntBASIC3.69□□□□□ -1.82
CTC1Q2NKJ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 Y_RNA.299-201ENST00000364973 94 ntBASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 HMGN2P34-201ENST00000437647 269 ntBASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 AC069257.2-201ENST00000441819 155 ntBASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 AC108729.3-201ENST00000513484 108 ntBASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 SNORA31.4-201ENST00000516049 129 ntBASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 AL162274.2-201ENST00000614406 332 ntBASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTC1Q2NKJ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms