Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 RN7SKP200-201ENST00000410564 320 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 RNA5SP39-201ENST00000411245 120 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 COTL1P1-201ENST00000422309 375 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 SNORA70.19-201ENST00000516717 90 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX1-1Q15270 MIR486-1-201ENST00000612171 68 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX1-1Q15270 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX1-1Q15270 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX1-1Q15270 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NKX1-1Q15270 RNU6-661P-201ENST00000362409 107 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 Y_RNA.241-201ENST00000364470 117 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 MIR1262-201ENST00000408276 93 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 SNORA19.1-201ENST00000410656 129 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 SNX2P2-201ENST00000424553 323 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 VWA8P1-201ENST00000510889 176 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 AC005786.1-201ENST00000588553 154 ntBASIC4.26□□□□□ -1.73
NKX1-1Q15270 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX1-1Q15270 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NKX1-1Q15270 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX1-1Q15270 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX1-1Q15270 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-34-201ENST00000362441 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-12-201ENST00000362583 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-29-201ENST00000362834 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-9-201ENST00000362912 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-21-201ENST00000362963 81 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-14-201ENST00000363090 81 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-13-201ENST00000363358 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-41-201ENST00000363608 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-11-201ENST00000363616 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-5-201ENST00000363633 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-39-201ENST00000363694 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-4-201ENST00000363810 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-16-201ENST00000363887 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-6-201ENST00000363942 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-42-201ENST00000364273 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-15-201ENST00000364809 81 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-1-201ENST00000364961 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-26-201ENST00000365067 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-10-201ENST00000365073 81 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-43-201ENST00000365503 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 SNORD115-36-201ENST00000365629 82 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 MIR29C-201ENST00000385231 88 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 Y_RNA.601-201ENST00000410500 113 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 RNA5SP229-201ENST00000410809 99 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 STAG3L5P-204ENST00000443759 179 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.25□□□□□ -1.73
NKX1-1Q15270 AC091826.1-201ENST00000514065 313 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 RNU2-35P-201ENST00000516446 142 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 AC022523.2-201ENST00000561045 150 ntBASIC4.25□□□□□ -1.73
NKX1-1Q15270 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NKX1-1Q15270 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
NKX1-1Q15270 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX1-1Q15270 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX1-1Q15270 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX1-1Q15270 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX1-1Q15270 MIR342-201ENST00000362212 99 ntBASIC4.24□□□□□ -1.73
NKX1-1Q15270 Y_RNA.96-201ENST00000363092 109 ntBASIC4.24□□□□□ -1.73
NKX1-1Q15270 AC114811.1-201ENST00000507207 168 ntBASIC4.24□□□□□ -1.73
NKX1-1Q15270 AC008885.1-201ENST00000514930 301 ntBASIC4.24□□□□□ -1.73
NKX1-1Q15270 AL360157.1-201ENST00000565962 87 ntBASIC4.24□□□□□ -1.73
NKX1-1Q15270 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NKX1-1Q15270 CEP170P1-201ENST00000502249 4587 ntBASIC4.24□□□□□ -1.73
NKX1-1Q15270 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX1-1Q15270 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX1-1Q15270 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX1-1Q15270 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NKX1-1Q15270 RNY3P2-201ENST00000362918 102 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 SNORA1.2-201ENST00000365189 134 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 RNU6-998P-201ENST00000515894 101 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 RN7SKP12-201ENST00000516275 143 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 MIR3169-201ENST00000578032 83 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 AC069114.2-201ENST00000604699 304 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 MIR8054-201ENST00000620877 86 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 AC017071.1-201ENST00000564407 2204 ntBASIC4.23□□□□□ -1.73
NKX1-1Q15270 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX1-1Q15270 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX1-1Q15270 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX1-1Q15270 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX1-1Q15270 RNU6-1019P-201ENST00000364424 107 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 SNORA54-201ENST00000384281 123 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 RNA5SP144-201ENST00000410846 116 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 IGLV3-17-201ENST00000519099 244 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 MIR4672-201ENST00000583126 81 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 uc_338.25-201ENST00000613756 156 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.22□□□□□ -1.73
NKX1-1Q15270 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX1-1Q15270 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
NKX1-1Q15270 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX1-1Q15270 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX1-1Q15270 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX1-1Q15270 SNORA70.7-201ENST00000384159 133 ntBASIC4.21□□□□□ -1.74
NKX1-1Q15270 RNY1P7-201ENST00000384743 110 ntBASIC4.21□□□□□ -1.74
NKX1-1Q15270 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NKX1-1Q15270 AC090543.2-201ENST00000483963 348 ntBASIC4.21□□□□□ -1.74
NKX1-1Q15270 RPS23P4-201ENST00000487908 423 ntBASIC4.21□□□□□ -1.74
NKX1-1Q15270 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.21□□□□□ -1.74
NKX1-1Q15270 MIR622-201ENST00000638396 96 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms