Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC245060.5-201ENST00000610778 3293 ntBASIC2.99□□□□□ -1.93
PCDH1Q08174 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
PCDH1Q08174 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH1Q08174 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PCDH1Q08174 AC073325.2-201ENST00000339545 159 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 RNU6-862P-201ENST00000362804 105 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 MIR548O-201ENST00000408583 114 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 RNA5SP136-201ENST00000410906 107 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 CALM2P4-201ENST00000430810 426 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 SNORA59A-201ENST00000459326 152 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 TRBV12-1-201ENST00000479785 344 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 MIR4762-201ENST00000585261 75 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 U4atac.1-201ENST00000618345 95 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 MIR376A2-201ENST00000636782 80 ntBASIC2.98□□□□□ -1.93
PCDH1Q08174 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDH1Q08174 RNU6-1255P-201ENST00000363434 112 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 SNORD14E-201ENST00000364009 85 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 U8.5-201ENST00000364528 136 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 RNU6-442P-201ENST00000383968 104 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 MIR887-201ENST00000401258 79 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 RN7SKP284-201ENST00000411002 343 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 AC006441.5-201ENST00000612680 209 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 AL137067.1-201ENST00000615933 120 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 AC134878.1-201ENST00000619901 243 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 CTSLP2-204ENST00000629029 392 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 MIR3651-201ENST00000630427 90 ntBASIC2.97□□□□□ -1.93
PCDH1Q08174 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PCDH1Q08174 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
PCDH1Q08174 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.96□□□□□ -1.93
PCDH1Q08174 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDH1Q08174 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH1Q08174 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PCDH1Q08174 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.96□□□□□ -1.94
PCDH1Q08174 RNA5SP493-201ENST00000364115 91 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 Y_RNA.366-201ENST00000365540 102 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 Y_RNA.410-201ENST00000383992 113 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 MIR570-201ENST00000384917 97 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 AL031737.1-201ENST00000450125 223 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 RNU6-412P-201ENST00000516434 106 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 AC005000.2-201ENST00000605468 310 ntBASIC2.96□□□□□ -1.94
PCDH1Q08174 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PCDH1Q08174 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PCDH1Q08174 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.95□□□□□ -1.94
PCDH1Q08174 Y_RNA.116-201ENST00000363292 103 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 MIR128-1-201ENST00000384921 82 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDH1Q08174 AL445687.1-201ENST00000439946 251 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 RN7SKP57-201ENST00000517248 293 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 UBL5P2-201ENST00000583788 219 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 uc_338.28-201ENST00000612082 187 ntBASIC2.95□□□□□ -1.94
PCDH1Q08174 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PCDH1Q08174 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PCDH1Q08174 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PCDH1Q08174 MIR450A1-201ENST00000362262 91 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 RNU6-1084P-201ENST00000362498 107 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 Y_RNA.281-201ENST00000364774 94 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 snoU2-30.1-201ENST00000365012 70 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 RNU6-1189P-201ENST00000383958 107 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 SNORA54-201ENST00000384281 123 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 SNORA48.2-201ENST00000390926 124 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH1Q08174 AL049873.1-201ENST00000480540 376 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 RN7SL297P-201ENST00000483161 293 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 COX6CP6-201ENST00000490840 228 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 RNU7-25P-201ENST00000516544 62 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 AC007012.1-201ENST00000567192 175 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 MIR3169-201ENST00000578032 83 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDH1Q08174 AL449363.1-201ENST00000617815 186 ntBASIC2.94□□□□□ -1.94
PCDH1Q08174 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH1Q08174 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDH1Q08174 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDH1Q08174 RNU6-23P-201ENST00000363283 107 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 RNU6-268P-201ENST00000364174 107 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 SNORA2.2-201ENST00000365473 135 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 RNU6-32P-201ENST00000383948 107 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 RNU6-13P-201ENST00000384248 107 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 RNU6-12P-201ENST00000384604 107 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 RNU6-41P-201ENST00000384741 107 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PCDH1Q08174 AC099677.2-201ENST00000436385 175 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 RPS26P48-201ENST00000491713 339 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDH1Q08174 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDH1Q08174 AC004486.1-201ENST00000546846 233 ntBASIC2.93□□□□□ -1.94
PCDH1Q08174 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDH1Q08174 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH1Q08174 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH1Q08174 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH1Q08174 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH1Q08174 Y_RNA.495-201ENST00000384435 112 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 RNA5SP482-201ENST00000391269 118 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 AC245047.3-201ENST00000429428 127 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms