Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.03□□□□□ -1.92
SOX4Q06945 AC062016.1-201ENST00000355719 319 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 Y_RNA.328-201ENST00000365208 113 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 MIR518F-201ENST00000384973 87 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 MIR1302-5-201ENST00000408164 150 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.03□□□□□ -1.92
SOX4Q06945 HMGN2P32-201ENST00000444648 269 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 RPS29P12-201ENST00000460178 152 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 RNU6-1041P-201ENST00000516254 102 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 SNORA48.11-201ENST00000517015 89 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 Y_RNA.714-201ENST00000517065 90 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 AC087685.1-201ENST00000587507 141 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SOX4Q06945 MIR376A2-201ENST00000636782 80 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SOX4Q06945 ZNF271P-202ENST00000465539 1970 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
SOX4Q06945 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
SOX4Q06945 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
SOX4Q06945 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.02□□□□□ -1.93
SOX4Q06945 SNORA51.5-201ENST00000384126 131 ntBASIC3.02□□□□□ -1.93
SOX4Q06945 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SOX4Q06945 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.02□□□□□ -1.93
SOX4Q06945 AL358944.1-201ENST00000528537 144 ntBASIC3.02□□□□□ -1.93
SOX4Q06945 AL356280.1-201ENST00000603614 379 ntBASIC3.02□□□□□ -1.93
SOX4Q06945 AP001318.4-201ENST00000616637 121 ntBASIC3.02□□□□□ -1.93
SOX4Q06945 AL591926.4-201ENST00000616895 298 ntBASIC3.02□□□□□ -1.93
SOX4Q06945 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.02□□□□□ -1.93
SOX4Q06945 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SOX4Q06945 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SOX4Q06945 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SOX4Q06945 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SOX4Q06945 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SOX4Q06945 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SOX4Q06945 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SOX4Q06945 RNU6-640P-201ENST00000363693 105 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 SNORA68.1-201ENST00000364537 132 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 EDDM3CP-201ENST00000415977 425 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 FTH1P12-201ENST00000432137 551 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 SEM1P1-201ENST00000506694 209 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
SOX4Q06945 RNU6-240P-201ENST00000516098 97 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 RNU1-142P-201ENST00000516682 145 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 MIR5197-201ENST00000583721 112 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 MIR338-201ENST00000636369 67 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 U6.108-201ENST00000637764 58 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.01□□□□□ -1.93
SOX4Q06945 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SOX4Q06945 AC092435.3-201ENST00000565538 3654 ntBASIC3.01□□□□□ -1.93
SOX4Q06945 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SOX4Q06945 SNORA63.5-201ENST00000363548 123 ntBASIC3□□□□□ -1.93
SOX4Q06945 U8.6-201ENST00000364939 135 ntBASIC3□□□□□ -1.93
SOX4Q06945 RNU6-1014P-201ENST00000383940 103 ntBASIC3□□□□□ -1.93
SOX4Q06945 MIR512-1-201ENST00000384913 84 ntBASIC3□□□□□ -1.93
SOX4Q06945 MIR522-201ENST00000385071 87 ntBASIC3□□□□□ -1.93
SOX4Q06945 AL138827.1-201ENST00000402666 306 ntBASIC3□□□□□ -1.93
SOX4Q06945 AL117342.1-201ENST00000404861 406 ntBASIC3□□□□□ -1.93
SOX4Q06945 AL109933.2-201ENST00000452651 260 ntBASIC3□□□□□ -1.93
SOX4Q06945 RPS26P48-201ENST00000491713 339 ntBASIC3□□□□□ -1.93
SOX4Q06945 AC023141.11-201ENST00000508864 202 ntBASIC3□□□□□ -1.93
SOX4Q06945 RPL23AP94-201ENST00000512518 302 ntBASIC3□□□□□ -1.93
SOX4Q06945 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3□□□□□ -1.93
SOX4Q06945 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3□□□□□ -1.93
SOX4Q06945 AL035470.1-201ENST00000622571 220 ntBASIC3□□□□□ -1.93
SOX4Q06945 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SOX4Q06945 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
SOX4Q06945 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SOX4Q06945 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX4Q06945 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SOX4Q06945 Y_RNA.49-201ENST00000362714 112 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 Y_RNA.198-201ENST00000364013 98 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 SNORD73B-201ENST00000364394 72 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 Y_RNA.500-201ENST00000384466 111 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 AL353689.1-201ENST00000438895 199 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 AL049830.1-201ENST00000468034 425 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 RPL39P34-201ENST00000477141 156 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 RNU6-844P-201ENST00000517175 102 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 AL355297.2-201ENST00000604792 129 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 RNU6-94P-201ENST00000607728 107 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 AC134878.1-201ENST00000619901 243 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX4Q06945 AL589743.1-201ENST00000551932 2712 ntBASIC2.99□□□□□ -1.93
SOX4Q06945 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX4Q06945 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX4Q06945 Y_RNA.410-201ENST00000383992 113 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 MIR802-201ENST00000390235 94 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 RNU2-63P-201ENST00000410792 194 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 RNA5SP184-201ENST00000411071 108 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 RPS29P6-201ENST00000438196 145 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 SNORD109B-201ENST00000458961 67 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 SNORD109A-201ENST00000459128 67 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 AC003982.1-202ENST00000469928 248 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms