Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AP001485.1-201ENST00000604799 199 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.82□□□□□ -2.12
ERVFC1-1P60608 U6.108-201ENST00000637764 58 ntBASIC1.82□□□□□ -2.12
ERVFC1-1P60608 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.99-201ENST00000363138 105 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 SNORA33-201ENST00000363664 130 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.203-201ENST00000364106 102 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNU4-11P-201ENST00000365287 132 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNU6-728P-201ENST00000365375 104 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNY3P5-201ENST00000384127 102 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.497-201ENST00000384447 98 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNA5SP496-201ENST00000391240 109 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AL117342.1-201ENST00000404861 406 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 MIR548I2-201ENST00000408348 149 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNU6-1186P-201ENST00000410429 97 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNU4-43P-201ENST00000410628 137 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.622-201ENST00000411091 108 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AC009238.1-201ENST00000442165 424 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AC009237.6-201ENST00000446969 424 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 RNA5SP364-201ENST00000516938 78 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AC011604.1-201ENST00000545978 196 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 U4atac.1-201ENST00000618345 95 ntBASIC1.81□□□□□ -2.12
ERVFC1-1P60608 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.81□□□□□ -2.12
ERVFC1-1P60608 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ERVFC1-1P60608 SNORD45.3-201ENST00000363836 72 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.796-201ENST00000364268 102 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.799-201ENST00000364992 102 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.587-201ENST00000391210 103 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 RNU1-131P-201ENST00000458943 161 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 RNU6-717P-201ENST00000459076 104 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 RNU6-1146P-201ENST00000516282 102 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 RNU6-1096P-201ENST00000517089 102 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AC091178.2-201ENST00000584401 117 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AL031274.2-201ENST00000599419 203 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AL049861.1-201ENST00000603130 150 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AC067747.1-201ENST00000608026 250 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AL353149.1-201ENST00000610667 244 ntBASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.8□□□□□ -2.12
ERVFC1-1P60608 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.8□□□□□ -2.12
ERVFC1-1P60608 RNU6-1209P-201ENST00000363655 107 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU6-1164P-201ENST00000364428 107 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.337-201ENST00000365312 102 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.343-201ENST00000365354 112 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU6-484P-201ENST00000384016 107 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU6-160P-201ENST00000384591 107 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU6-768P-201ENST00000384683 107 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU6-257P-201ENST00000410238 98 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU2-52P-201ENST00000410680 190 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 SNORD11-201ENST00000459124 84 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RNU7-99P-201ENST00000516271 62 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 RPL23AP91-201ENST00000569211 455 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 MIR548X2-201ENST00000579776 100 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 AC007229.1-201ENST00000590455 412 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 AC022202.1-201ENST00000613515 211 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 AC100821.1-201ENST00000523153 2479 ntBASIC1.79□□□□□ -2.12
ERVFC1-1P60608 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
ERVFC1-1P60608 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
ERVFC1-1P60608 RNU4-82P-201ENST00000362443 140 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 RNY1P11-201ENST00000363759 113 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 RNA5SP493-201ENST00000364115 91 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 RNU1-148P-201ENST00000384472 162 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 Y_RNA.586-201ENST00000391146 98 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 EDDM3CP-201ENST00000415977 425 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.78□□□□□ -2.12
ERVFC1-1P60608 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 RNU7-197P-201ENST00000458836 62 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 YWHAEP4-201ENST00000505390 198 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 SNORA25.12-201ENST00000516202 82 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.78□□□□□ -2.12
ERVFC1-1P60608 MIR3169-201ENST00000578032 83 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 AC022513.1-201ENST00000624512 117 ntBASIC1.78□□□□□ -2.12
ERVFC1-1P60608 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RNA5SP68-201ENST00000363885 119 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RNU6-1080P-201ENST00000383982 107 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.77□□□□□ -2.13
ERVFC1-1P60608 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RPS29P21-201ENST00000496272 170 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RN7SL636P-201ENST00000497504 294 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 SNORD77.4-201ENST00000516158 81 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RNU6-1291P-201ENST00000516591 104 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RNU1-40P-201ENST00000516816 164 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 RNU1-97P-201ENST00000516872 164 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 AL359075.3-201ENST00000613288 217 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
ERVFC1-1P60608 MIR6817-201ENST00000615588 66 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 uc_338.4-201ENST00000616635 176 ntBASIC1.77□□□□□ -2.13
ERVFC1-1P60608 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
ERVFC1-1P60608 RNU6-862P-201ENST00000362804 105 ntBASIC1.76□□□□□ -2.13
ERVFC1-1P60608 Y_RNA.291-201ENST00000364886 113 ntBASIC1.76□□□□□ -2.13
ERVFC1-1P60608 SNORA20-201ENST00000384662 132 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms