Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORD14A-201ENST00000606526 91 ntBASIC2.52□□□□□ -2.01
GFRA1P56159 SNORA28-201ENST00000606769 126 ntBASIC2.52□□□□□ -2.01
GFRA1P56159 MIR8054-201ENST00000620877 86 ntBASIC2.52□□□□□ -2.01
GFRA1P56159 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
GFRA1P56159 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GFRA1P56159 RNU6-1084P-201ENST00000362498 107 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 U8.5-201ENST00000364528 136 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 RNU6-1082P-201ENST00000364574 107 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 RNU6-950P-201ENST00000384651 107 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 SNORA20-201ENST00000384662 132 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
GFRA1P56159 RNU6-440P-201ENST00000390882 105 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 SNORD72-201ENST00000390994 80 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 MIR548I2-201ENST00000408348 149 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.51□□□□□ -2.01
GFRA1P56159 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
GFRA1P56159 RNU7-197P-201ENST00000458836 62 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 AC092991.1-201ENST00000477176 376 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 AP004217.1-201ENST00000480579 346 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.51□□□□□ -2.01
GFRA1P56159 MIR4762-201ENST00000585261 75 ntBASIC2.51□□□□□ -2.01
GFRA1P56159 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
GFRA1P56159 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GFRA1P56159 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
GFRA1P56159 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 snoU2-30.1-201ENST00000365012 70 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 RNU6-959P-201ENST00000384671 107 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 MIR9-1-201ENST00000385198 89 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 SNORA48.1-201ENST00000390879 135 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 RNA5SP21-201ENST00000410917 96 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 MTND4LP9-201ENST00000427694 174 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 RPS29P6-201ENST00000438196 145 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 STAG3L5P-204ENST00000443759 179 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 AC006023.1-201ENST00000603944 259 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.5□□□□□ -2.01
GFRA1P56159 AC108206.1-201ENST00000570186 4159 ntBASIC2.5□□□□□ -2.01
GFRA1P56159 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
GFRA1P56159 MIR26A1-201ENST00000362205 77 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 Y_RNA.66-201ENST00000362862 102 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 SNORD14E-201ENST00000364009 85 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 Y_RNA.584-201ENST00000391090 114 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 RNU6-460P-201ENST00000391158 108 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 RN7SKP200-201ENST00000410564 320 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 CYCSP49-201ENST00000420810 319 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 AC003982.1-202ENST00000469928 248 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 RN7SL499P-201ENST00000481141 276 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
GFRA1P56159 MIR548AI-201ENST00000579940 88 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.49□□□□□ -2.01
GFRA1P56159 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 TUG1_4.1-201ENST00000619464 181 ntBASIC2.49□□□□□ -2.01
GFRA1P56159 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
GFRA1P56159 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
GFRA1P56159 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.48□□□□□ -2.01
GFRA1P56159 AC062016.1-201ENST00000355719 319 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 MIR539-201ENST00000365690 78 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 SNORD24-201ENST00000383884 75 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 RNU6-442P-201ENST00000383968 104 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 RNU6-1081P-201ENST00000384537 107 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
GFRA1P56159 RNU2-7P-201ENST00000410794 178 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.48□□□□□ -2.01
GFRA1P56159 SNORA59A-201ENST00000459326 152 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 RNVU1-2-201ENST00000516326 135 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 SNORA18.4-201ENST00000516440 124 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 RNU6-62P-201ENST00000516526 102 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 AP001328.1-201ENST00000528550 176 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 MIR4319-201ENST00000577285 85 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.48□□□□□ -2.01
GFRA1P56159 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
GFRA1P56159 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.48□□□□□ -2.01
GFRA1P56159 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.48□□□□□ -2.01
GFRA1P56159 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
GFRA1P56159 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
GFRA1P56159 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
GFRA1P56159 Y_RNA.251-201ENST00000364551 99 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 SNORD50B-201ENST00000364995 70 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 RNU1-51P-201ENST00000365345 176 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 RNU6-1336P-201ENST00000383886 109 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 MIR520A-201ENST00000384862 85 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 MIR3605-201ENST00000583214 100 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 U1.36-201ENST00000620684 176 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 MIR6852-201ENST00000621699 66 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 AP001340.1-201ENST00000624405 217 ntBASIC2.47□□□□□ -2.01
GFRA1P56159 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.47□□□□□ -2.01
GFRA1P56159 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
GFRA1P56159 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 SNORA63D-201ENST00000364359 132 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 Y_RNA.291-201ENST00000364886 113 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 Y_RNA.542-201ENST00000384641 111 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 MIR887-201ENST00000401258 79 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 AL034345.1-201ENST00000407768 123 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 RNA5SP501-201ENST00000410990 112 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms