Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.233-201ENST00000364407 101 ntBASIC2.14□□□□□ -2.07
COPB1P53618 RNU6-136P-201ENST00000384663 107 ntBASIC2.14□□□□□ -2.07
COPB1P53618 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
COPB1P53618 MIR526A2-201ENST00000390198 65 ntBASIC2.14□□□□□ -2.07
COPB1P53618 RNU6-381P-201ENST00000391259 108 ntBASIC2.14□□□□□ -2.07
COPB1P53618 RNU2-2P-201ENST00000410396 191 ntBASIC2.14□□□□□ -2.07
COPB1P53618 SNORA36B-201ENST00000410438 131 ntBASIC2.14□□□□□ -2.07
COPB1P53618 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.14□□□□□ -2.07
COPB1P53618 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.14□□□□□ -2.07
COPB1P53618 RNU6-1278P-201ENST00000516130 107 ntBASIC2.14□□□□□ -2.07
COPB1P53618 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
COPB1P53618 RNU7-116P-201ENST00000516940 62 ntBASIC2.14□□□□□ -2.07
COPB1P53618 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.14□□□□□ -2.07
COPB1P53618 AL031274.2-201ENST00000599419 203 ntBASIC2.14□□□□□ -2.07
COPB1P53618 SNORD14A-201ENST00000606526 91 ntBASIC2.14□□□□□ -2.07
COPB1P53618 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COPB1P53618 RNU6-23P-201ENST00000363283 107 ntBASIC2.13□□□□□ -2.07
COPB1P53618 snoU2_19.4-201ENST00000364329 80 ntBASIC2.13□□□□□ -2.07
COPB1P53618 Y_RNA.293-201ENST00000364908 93 ntBASIC2.13□□□□□ -2.07
COPB1P53618 Y_RNA.572-201ENST00000384757 98 ntBASIC2.13□□□□□ -2.07
COPB1P53618 SNORA40.19-201ENST00000390846 128 ntBASIC2.13□□□□□ -2.07
COPB1P53618 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
COPB1P53618 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
COPB1P53618 CST2P1-201ENST00000425770 87 ntBASIC2.13□□□□□ -2.07
COPB1P53618 RPS4XP11-201ENST00000446897 772 ntBASIC2.13□□□□□ -2.07
COPB1P53618 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
COPB1P53618 RNU6-861P-201ENST00000516745 106 ntBASIC2.13□□□□□ -2.07
COPB1P53618 MIR5688-201ENST00000580619 83 ntBASIC2.13□□□□□ -2.07
COPB1P53618 AC007229.1-201ENST00000590455 412 ntBASIC2.13□□□□□ -2.07
COPB1P53618 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.13□□□□□ -2.07
COPB1P53618 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.13□□□□□ -2.07
COPB1P53618 Y_RNA.802-201ENST00000614892 130 ntBASIC2.13□□□□□ -2.07
COPB1P53618 AL353997.5-201ENST00000618886 171 ntBASIC2.13□□□□□ -2.07
COPB1P53618 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COPB1P53618 RNU6-862P-201ENST00000362804 105 ntBASIC2.12□□□□□ -2.07
COPB1P53618 SNORD115-3-201ENST00000363100 82 ntBASIC2.12□□□□□ -2.07
COPB1P53618 RNU6-674P-201ENST00000363831 107 ntBASIC2.12□□□□□ -2.07
COPB1P53618 RNU4-17P-201ENST00000365598 141 ntBASIC2.12□□□□□ -2.07
COPB1P53618 SNORA72-201ENST00000384339 132 ntBASIC2.12□□□□□ -2.07
COPB1P53618 SNORA8.3-201ENST00000384679 139 ntBASIC2.12□□□□□ -2.07
COPB1P53618 Y_RNA.571-201ENST00000384753 98 ntBASIC2.12□□□□□ -2.07
COPB1P53618 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
COPB1P53618 MIR1283-2-201ENST00000408621 87 ntBASIC2.12□□□□□ -2.07
COPB1P53618 RNU6-1186P-201ENST00000410429 97 ntBASIC2.12□□□□□ -2.07
COPB1P53618 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
COPB1P53618 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
COPB1P53618 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
COPB1P53618 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
COPB1P53618 AC073413.2-201ENST00000604332 360 ntBASIC2.12□□□□□ -2.07
COPB1P53618 AL359075.3-201ENST00000613288 217 ntBASIC2.12□□□□□ -2.07
COPB1P53618 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.12□□□□□ -2.07
COPB1P53618 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
COPB1P53618 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COPB1P53618 Y_RNA.7-201ENST00000362352 102 ntBASIC2.11□□□□□ -2.07
COPB1P53618 Y_RNA.24-201ENST00000362508 103 ntBASIC2.11□□□□□ -2.07
COPB1P53618 Y_RNA.270-201ENST00000364693 104 ntBASIC2.11□□□□□ -2.07
COPB1P53618 MIR1278-201ENST00000408753 81 ntBASIC2.11□□□□□ -2.07
COPB1P53618 RN7SKP51-201ENST00000410781 304 ntBASIC2.11□□□□□ -2.07
COPB1P53618 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.11□□□□□ -2.07
COPB1P53618 RPS26P45-201ENST00000471748 340 ntBASIC2.11□□□□□ -2.07
COPB1P53618 RN7SL274P-201ENST00000492268 272 ntBASIC2.11□□□□□ -2.07
COPB1P53618 SCARNA8-201ENST00000515924 131 ntBASIC2.11□□□□□ -2.07
COPB1P53618 RNU6-1219P-201ENST00000516143 112 ntBASIC2.11□□□□□ -2.07
COPB1P53618 U6.106-201ENST00000636360 105 ntBASIC2.11□□□□□ -2.07
COPB1P53618 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
COPB1P53618 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
COPB1P53618 Y_RNA.121-201ENST00000363309 113 ntBASIC2.1□□□□□ -2.07
COPB1P53618 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
COPB1P53618 Y_RNA.238-201ENST00000364441 102 ntBASIC2.1□□□□□ -2.07
COPB1P53618 Y_RNA.240-201ENST00000364469 95 ntBASIC2.1□□□□□ -2.07
COPB1P53618 RNU6-969P-201ENST00000383900 105 ntBASIC2.1□□□□□ -2.07
COPB1P53618 RNU6-376P-201ENST00000384731 106 ntBASIC2.1□□□□□ -2.07
COPB1P53618 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
COPB1P53618 HMGN2P39-201ENST00000398005 273 ntBASIC2.1□□□□□ -2.07
COPB1P53618 RNU6-383P-201ENST00000410864 94 ntBASIC2.1□□□□□ -2.07
COPB1P53618 AC074198.2-201ENST00000508153 258 ntBASIC2.1□□□□□ -2.07
COPB1P53618 RNA5SP458-201ENST00000516188 119 ntBASIC2.1□□□□□ -2.07
COPB1P53618 AC024995.1-201ENST00000523014 93 ntBASIC2.1□□□□□ -2.07
COPB1P53618 AC005786.1-201ENST00000588553 154 ntBASIC2.1□□□□□ -2.07
COPB1P53618 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
COPB1P53618 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.1□□□□□ -2.07
COPB1P53618 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.1□□□□□ -2.07
COPB1P53618 AC092881.1-201ENST00000638218 2733 ntBASIC2.1□□□□□ -2.07
COPB1P53618 RNU4-13P-201ENST00000364019 141 ntBASIC2.09□□□□□ -2.07
COPB1P53618 MIR515-2-201ENST00000384883 83 ntBASIC2.09□□□□□ -2.07
COPB1P53618 MIR515-1-201ENST00000384884 83 ntBASIC2.09□□□□□ -2.07
COPB1P53618 MIR764-201ENST00000390811 85 ntBASIC2.09□□□□□ -2.07
COPB1P53618 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
COPB1P53618 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.09□□□□□ -2.07
COPB1P53618 RNU6-437P-201ENST00000459408 95 ntBASIC2.09□□□□□ -2.07
COPB1P53618 RPL23AP54-201ENST00000495129 419 ntBASIC2.09□□□□□ -2.07
COPB1P53618 RN7SKP164-201ENST00000516138 266 ntBASIC2.09□□□□□ -2.07
COPB1P53618 RNU1-142P-201ENST00000516682 145 ntBASIC2.09□□□□□ -2.07
COPB1P53618 RNU6-1096P-201ENST00000517089 102 ntBASIC2.09□□□□□ -2.07
COPB1P53618 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.09□□□□□ -2.07
COPB1P53618 MIR4724-201ENST00000579485 89 ntBASIC2.09□□□□□ -2.07
COPB1P53618 AL929325.1-201ENST00000603096 117 ntBASIC2.09□□□□□ -2.07
COPB1P53618 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
COPB1P53618 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
COPB1P53618 AC100821.1-201ENST00000523153 2479 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms