Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.16□□□□□ -1.74
PRIM1P49642 uc_338.1-201ENST00000612113 180 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRIM1P49642 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.16□□□□□ -1.74
PRIM1P49642 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PRIM1P49642 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRIM1P49642 RNU6-1084P-201ENST00000362498 107 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 RNU6-743P-201ENST00000364151 106 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 RN7SKP220-201ENST00000410611 288 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 RNU2-63P-201ENST00000410792 194 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.15□□□□□ -1.75
PRIM1P49642 RN7SL442P-201ENST00000473804 320 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 RN7SL636P-201ENST00000497504 294 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 RNA5SP356-201ENST00000515972 94 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 RNU6-711P-201ENST00000517255 106 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 GTF3AP2-201ENST00000557014 266 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.15□□□□□ -1.75
PRIM1P49642 MIR3202-2-201ENST00000635980 79 ntBASIC4.15□□□□□ -1.75
PRIM1P49642 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRIM1P49642 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PRIM1P49642 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRIM1P49642 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PRIM1P49642 RNY3P2-201ENST00000362918 102 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC4.14□□□□□ -1.75
PRIM1P49642 SEM1P1-201ENST00000506694 209 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 RNU6-991P-201ENST00000516168 107 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 RNU7-25P-201ENST00000516544 62 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 MIR2276-201ENST00000516886 89 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 SNORA18.7-201ENST00000516910 131 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 MIR3186-201ENST00000577404 85 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 AC110079.1-202ENST00000635213 138 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 MIR338-201ENST00000636369 67 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRIM1P49642 AC008264.2-201ENST00000610193 3731 ntBASIC4.14□□□□□ -1.75
PRIM1P49642 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.14□□□□□ -1.75
PRIM1P49642 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.14□□□□□ -1.75
PRIM1P49642 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRIM1P49642 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.13□□□□□ -1.75
PRIM1P49642 Y_RNA.351-201ENST00000365436 96 ntBASIC4.13□□□□□ -1.75
PRIM1P49642 Y_RNA.547-201ENST00000384654 119 ntBASIC4.13□□□□□ -1.75
PRIM1P49642 AC006539.3-201ENST00000454258 129 ntBASIC4.13□□□□□ -1.75
PRIM1P49642 RNU6-893P-201ENST00000458841 100 ntBASIC4.13□□□□□ -1.75
PRIM1P49642 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.13□□□□□ -1.75
PRIM1P49642 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.13□□□□□ -1.75
PRIM1P49642 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRIM1P49642 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRIM1P49642 SNORA1B-201ENST00000362535 133 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 RNU6-268P-201ENST00000364174 107 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 SNORA71.1-201ENST00000364523 117 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 MT-TI-201ENST00000387365 69 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 RPL21P3-201ENST00000395517 478 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 RNA5SP229-201ENST00000410809 99 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 AC096949.1-201ENST00000412047 152 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 EEF1A1P41-201ENST00000414667 207 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.12□□□□□ -1.75
PRIM1P49642 AL035398.1-201ENST00000430869 322 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.12□□□□□ -1.75
PRIM1P49642 AC009238.1-201ENST00000442165 424 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 AC009237.6-201ENST00000446969 424 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 RN7SL330P-201ENST00000469709 307 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.12□□□□□ -1.75
PRIM1P49642 AC091826.1-201ENST00000514065 313 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 RNU7-28P-201ENST00000516759 62 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 AP003484.1-201ENST00000530974 250 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 MIR3162-201ENST00000581818 82 ntBASIC4.12□□□□□ -1.75
PRIM1P49642 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.12□□□□□ -1.75
PRIM1P49642 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
PRIM1P49642 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PRIM1P49642 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.11□□□□□ -1.75
PRIM1P49642 MIR494-201ENST00000349529 81 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 MIR340-201ENST00000362125 95 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 MIR561-201ENST00000385216 97 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.11□□□□□ -1.75
PRIM1P49642 RPL23AP67-201ENST00000465341 474 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 SNORD59.2-201ENST00000516873 68 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 MIR3945-201ENST00000581853 98 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 MIR3199-1-201ENST00000582434 88 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.11□□□□□ -1.75
PRIM1P49642 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRIM1P49642 MIR622-201ENST00000638396 96 ntBASIC4.11□□□□□ -1.75
PRIM1P49642 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRIM1P49642 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRIM1P49642 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRIM1P49642 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRIM1P49642 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRIM1P49642 RNU6-661P-201ENST00000362409 107 ntBASIC4.1□□□□□ -1.75
PRIM1P49642 SNORD68-201ENST00000363214 84 ntBASIC4.1□□□□□ -1.75
PRIM1P49642 RNA5SP482-201ENST00000391269 118 ntBASIC4.1□□□□□ -1.75
PRIM1P49642 RNA5SP467-201ENST00000391274 118 ntBASIC4.1□□□□□ -1.75
PRIM1P49642 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PRIM1P49642 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.1□□□□□ -1.75
PRIM1P49642 AL139132.1-201ENST00000431587 344 ntBASIC4.1□□□□□ -1.75
PRIM1P49642 RNU7-6P-201ENST00000516845 62 ntBASIC4.1□□□□□ -1.75
PRIM1P49642 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.1□□□□□ -1.75
PRIM1P49642 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRIM1P49642 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRIM1P49642 AC017071.1-201ENST00000564407 2204 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 SNORA8-201ENST00000384574 139 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PRIM1P49642 RNU6-592P-201ENST00000411333 103 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms