Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBRP36941 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBRP36941 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.64□□□□□ -1.99
LTBRP36941 RPS26P45-201ENST00000471748 340 ntBASIC2.64□□□□□ -1.99
LTBRP36941 HMGN1P7-201ENST00000491722 313 ntBASIC2.64□□□□□ -1.99
LTBRP36941 RNU7-149P-201ENST00000516739 59 ntBASIC2.64□□□□□ -1.99
LTBRP36941 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LTBRP36941 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LTBRP36941 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.63□□□□□ -1.99
LTBRP36941 RNU1-58P-201ENST00000362413 163 ntBASIC2.63□□□□□ -1.99
LTBRP36941 Y_RNA.253-201ENST00000364562 112 ntBASIC2.63□□□□□ -1.99
LTBRP36941 SNORA20-201ENST00000384662 132 ntBASIC2.63□□□□□ -1.99
LTBRP36941 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
LTBRP36941 RNU6-257P-201ENST00000410238 98 ntBASIC2.63□□□□□ -1.99
LTBRP36941 RNU2-70P-201ENST00000410718 179 ntBASIC2.63□□□□□ -1.99
LTBRP36941 AC099677.2-201ENST00000436385 175 ntBASIC2.63□□□□□ -1.99
LTBRP36941 RPS29P6-201ENST00000438196 145 ntBASIC2.63□□□□□ -1.99
LTBRP36941 RNU7-94P-201ENST00000459576 63 ntBASIC2.63□□□□□ -1.99
LTBRP36941 OR9P1P-201ENST00000496431 281 ntBASIC2.63□□□□□ -1.99
LTBRP36941 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.63□□□□□ -1.99
LTBRP36941 AC245166.1-201ENST00000521012 253 ntBASIC2.63□□□□□ -1.99
LTBRP36941 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.63□□□□□ -1.99
LTBRP36941 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.63□□□□□ -1.99
LTBRP36941 Pinc.1-201ENST00000616452 154 ntBASIC2.63□□□□□ -1.99
LTBRP36941 MIR7111-201ENST00000619751 72 ntBASIC2.63□□□□□ -1.99
LTBRP36941 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LTBRP36941 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.63□□□□□ -1.99
LTBRP36941 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
LTBRP36941 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LTBRP36941 SNORA40-201ENST00000388090 126 ntBASIC2.62□□□□□ -1.99
LTBRP36941 SNRPGP10-201ENST00000432323 225 ntBASIC2.62□□□□□ -1.99
LTBRP36941 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
LTBRP36941 RNA5SP385-201ENST00000515947 110 ntBASIC2.62□□□□□ -1.99
LTBRP36941 RNA5SP153-201ENST00000516498 76 ntBASIC2.62□□□□□ -1.99
LTBRP36941 AL358944.1-201ENST00000528537 144 ntBASIC2.62□□□□□ -1.99
LTBRP36941 AL160236.1-201ENST00000556317 195 ntBASIC2.62□□□□□ -1.99
LTBRP36941 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
LTBRP36941 AC120024.3-201ENST00000603167 156 ntBASIC2.62□□□□□ -1.99
LTBRP36941 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LTBRP36941 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LTBRP36941 AC008264.2-201ENST00000610193 3731 ntBASIC2.61□□□□□ -1.99
LTBRP36941 SNORA1B-201ENST00000362535 133 ntBASIC2.61□□□□□ -1.99
LTBRP36941 Y_RNA.91-201ENST00000363042 107 ntBASIC2.61□□□□□ -1.99
LTBRP36941 Y_RNA.291-201ENST00000364886 113 ntBASIC2.61□□□□□ -1.99
LTBRP36941 RNU6-597P-201ENST00000365620 102 ntBASIC2.61□□□□□ -1.99
LTBRP36941 SNORA12.1-201ENST00000390873 148 ntBASIC2.61□□□□□ -1.99
LTBRP36941 SNORA75.5-201ENST00000391291 81 ntBASIC2.61□□□□□ -1.99
LTBRP36941 RNU6-588P-201ENST00000410281 105 ntBASIC2.61□□□□□ -1.99
LTBRP36941 CYCSP49-201ENST00000420810 319 ntBASIC2.61□□□□□ -1.99
LTBRP36941 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LTBRP36941 HMGN2P23-201ENST00000456759 269 ntBASIC2.61□□□□□ -1.99
LTBRP36941 NDUFA4P2-201ENST00000489989 244 ntBASIC2.61□□□□□ -1.99
LTBRP36941 AP002004.2-201ENST00000531656 154 ntBASIC2.61□□□□□ -1.99
LTBRP36941 AC046143.2-201ENST00000609789 160 ntBASIC2.61□□□□□ -1.99
LTBRP36941 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.61□□□□□ -1.99
LTBRP36941 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.61□□□□□ -1.99
LTBRP36941 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LTBRP36941 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LTBRP36941 RNU6-1138P-201ENST00000365359 106 ntBASIC2.6□□□□□ -1.99
LTBRP36941 U8.9-201ENST00000365667 134 ntBASIC2.6□□□□□ -1.99
LTBRP36941 Y_RNA.420-201ENST00000384043 110 ntBASIC2.6□□□□□ -1.99
LTBRP36941 RNU6-1117P-201ENST00000384525 104 ntBASIC2.6□□□□□ -1.99
LTBRP36941 RNU6-959P-201ENST00000384671 107 ntBASIC2.6□□□□□ -1.99
LTBRP36941 SNORA11.4-201ENST00000408823 129 ntBASIC2.6□□□□□ -1.99
LTBRP36941 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.6□□□□□ -1.99
LTBRP36941 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
LTBRP36941 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
LTBRP36941 RNA5SP281-201ENST00000516504 135 ntBASIC2.6□□□□□ -1.99
LTBRP36941 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
LTBRP36941 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.6□□□□□ -1.99
LTBRP36941 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.6□□□□□ -1.99
LTBRP36941 AL353997.5-201ENST00000618886 171 ntBASIC2.6□□□□□ -1.99
LTBRP36941 AC022513.1-201ENST00000624512 117 ntBASIC2.6□□□□□ -1.99
LTBRP36941 MIR126-201ENST00000362291 85 ntBASIC2.59□□□□□ -1.99
LTBRP36941 RNU6-1082P-201ENST00000364574 107 ntBASIC2.59□□□□□ -1.99
LTBRP36941 Y_RNA.634-201ENST00000364811 113 ntBASIC2.59□□□□□ -1.99
LTBRP36941 SNORA26-201ENST00000391286 122 ntBASIC2.59□□□□□ -1.99
LTBRP36941 RPL21P3-201ENST00000395517 478 ntBASIC2.59□□□□□ -1.99
LTBRP36941 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.59□□□□□ -1.99
LTBRP36941 MLLT10P1-201ENST00000418346 262 ntBASIC2.59□□□□□ -1.99
LTBRP36941 MTND4LP9-201ENST00000427694 174 ntBASIC2.59□□□□□ -1.99
LTBRP36941 AC245047.4-201ENST00000433189 144 ntBASIC2.59□□□□□ -1.99
LTBRP36941 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.59□□□□□ -1.99
LTBRP36941 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.59□□□□□ -1.99
LTBRP36941 RNU7-197P-201ENST00000458836 62 ntBASIC2.59□□□□□ -1.99
LTBRP36941 AL049830.1-201ENST00000468034 425 ntBASIC2.59□□□□□ -1.99
LTBRP36941 AC092991.1-201ENST00000477176 376 ntBASIC2.59□□□□□ -1.99
LTBRP36941 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
LTBRP36941 RNU2-56P-201ENST00000516826 190 ntBASIC2.59□□□□□ -1.99
LTBRP36941 MIR4662B-201ENST00000579498 81 ntBASIC2.59□□□□□ -1.99
LTBRP36941 MIR4506-201ENST00000584693 77 ntBASIC2.59□□□□□ -1.99
LTBRP36941 AC005786.1-201ENST00000588553 154 ntBASIC2.59□□□□□ -1.99
LTBRP36941 AL591926.4-201ENST00000616895 298 ntBASIC2.59□□□□□ -1.99
LTBRP36941 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -1.99
LTBRP36941 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
LTBRP36941 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LTBRP36941 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -2
LTBRP36941 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
LTBRP36941 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LTBRP36941 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms