Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-862P-201ENST00000362804 105 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 snoU2_19.4-201ENST00000364329 80 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 Y_RNA.229-201ENST00000364347 113 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 Y_RNA.441-201ENST00000384123 112 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 RNU6-578P-201ENST00000390980 103 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 AC023449.1-201ENST00000454464 154 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 AC091178.2-201ENST00000584401 117 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 AC080100.1-201ENST00000624239 5356 ntBASIC2.28□□□□□ -2.04
SLC6A4P31645 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SLC6A4P31645 Y_RNA.203-201ENST00000364106 102 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 RNU4-41P-201ENST00000364426 143 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 MIR1289-2-201ENST00000408360 111 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 RN7SKP101-201ENST00000411376 320 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 AL603825.1-201ENST00000438481 80 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 AC069257.2-201ENST00000441819 155 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 Y_RNA.676-201ENST00000516393 96 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 RNU6-548P-201ENST00000517083 115 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 AC069114.2-201ENST00000604699 304 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 AC108706.1-201ENST00000611053 297 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 AC022202.1-201ENST00000613515 211 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 AC009831.4-201ENST00000620744 325 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 MIR6873-201ENST00000622788 63 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC6A4P31645 U6.108-201ENST00000637764 58 ntBASIC2.27□□□□□ -2.05
SLC6A4P31645 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC6A4P31645 Y_RNA.357-201ENST00000365487 109 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 Y_RNA.412-201ENST00000384001 104 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 MIR518A2-201ENST00000384966 87 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 MIR764-201ENST00000390811 85 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 AL023284.1-201ENST00000403956 276 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 RNU6-383P-201ENST00000410864 94 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 RNU6-1135P-201ENST00000411083 103 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 HMGN2P3-201ENST00000433603 273 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 HMGN2P5-201ENST00000436882 273 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC6A4P31645 AC091021.1-201ENST00000468051 388 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 RNU6-1007P-201ENST00000516586 107 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.26□□□□□ -2.05
SLC6A4P31645 RNU6-1019P-201ENST00000364424 107 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 SNORA64-201ENST00000384674 134 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 RNU11-3P-201ENST00000391111 133 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 HMGN2P39-201ENST00000398005 273 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 AC099677.2-201ENST00000436385 175 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 AL163195.1-201ENST00000496941 348 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 AP002004.2-201ENST00000531656 154 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 AL929325.1-201ENST00000603096 117 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC6A4P31645 JPX_2.1-201ENST00000614161 69 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
SLC6A4P31645 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SLC6A4P31645 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 RNU6-728P-201ENST00000365375 104 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 SNORA67.3-201ENST00000384366 140 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 RN7SKP51-201ENST00000410781 304 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 RNU2-55P-201ENST00000411146 174 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 AC245047.8-201ENST00000456455 284 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC6A4P31645 AC074198.2-201ENST00000508153 258 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 RNU6-126P-201ENST00000516685 103 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC6A4P31645 AC109810.1-201ENST00000534066 224 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 AL021707.8-201ENST00000609428 183 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.24□□□□□ -2.05
SLC6A4P31645 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
SLC6A4P31645 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SLC6A4P31645 Y_RNA.242-201ENST00000364473 110 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 Y_RNA.572-201ENST00000384757 98 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 AL606845.1-201ENST00000404881 255 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 MIR548M-201ENST00000408260 86 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 MIR1283-2-201ENST00000408621 87 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 Y_RNA.621-201ENST00000411065 96 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 SCARNA8-201ENST00000515924 131 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 Y_RNA.714-201ENST00000517065 90 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.23□□□□□ -2.05
SLC6A4P31645 MIR4431-201ENST00000579990 94 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 AC022513.1-201ENST00000624512 117 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 AC245060.5-201ENST00000610778 3293 ntBASIC2.23□□□□□ -2.05
SLC6A4P31645 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SLC6A4P31645 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
SLC6A4P31645 SNORA33-201ENST00000363664 130 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SLC6A4P31645 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 RNU6-394P-201ENST00000410735 107 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 AC233266.1-201ENST00000454518 96 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 RPL23AP42-201ENST00000471152 471 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 RNA5SP458-201ENST00000516188 119 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 RNU6-453P-201ENST00000516819 85 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 AL365434.2-201ENST00000607979 234 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 AC242852.1-201ENST00000612151 96 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 AC244015.1-201ENST00000622301 99 ntBASIC2.22□□□□□ -2.05
SLC6A4P31645 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.05
SLC6A4P31645 RNU4-84P-201ENST00000364200 139 ntBASIC2.21□□□□□ -2.06
SLC6A4P31645 Y_RNA.267-201ENST00000364679 109 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 277.4 ms