Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC104332.2-201ENST00000429959 156 ntBASIC2.47□□□□□ -2.01
CTGFP29279 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.47□□□□□ -2.01
CTGFP29279 Y_RNA.651-201ENST00000459380 103 ntBASIC2.47□□□□□ -2.01
CTGFP29279 RNU6-965P-201ENST00000516721 96 ntBASIC2.47□□□□□ -2.01
CTGFP29279 AC025647.1-201ENST00000517879 253 ntBASIC2.47□□□□□ -2.01
CTGFP29279 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.47□□□□□ -2.01
CTGFP29279 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.47□□□□□ -2.01
CTGFP29279 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTGFP29279 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.47□□□□□ -2.01
CTGFP29279 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.46□□□□□ -2.02
CTGFP29279 RNU1-23P-201ENST00000363361 144 ntBASIC2.46□□□□□ -2.02
CTGFP29279 RNU6-324P-201ENST00000363957 106 ntBASIC2.46□□□□□ -2.02
CTGFP29279 SNORD115-30-201ENST00000364117 82 ntBASIC2.46□□□□□ -2.02
CTGFP29279 Y_RNA.348-201ENST00000365403 103 ntBASIC2.46□□□□□ -2.02
CTGFP29279 SNORD116-21-201ENST00000384507 92 ntBASIC2.46□□□□□ -2.02
CTGFP29279 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CTGFP29279 SNORD88.1-201ENST00000408684 91 ntBASIC2.46□□□□□ -2.02
CTGFP29279 MIR1185-2-201ENST00000408687 86 ntBASIC2.46□□□□□ -2.02
CTGFP29279 U3.40-201ENST00000408706 208 ntBASIC2.46□□□□□ -2.02
CTGFP29279 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.46□□□□□ -2.02
CTGFP29279 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CTGFP29279 AC108729.3-201ENST00000513484 108 ntBASIC2.46□□□□□ -2.02
CTGFP29279 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
CTGFP29279 RNU6-1061P-201ENST00000516530 99 ntBASIC2.46□□□□□ -2.02
CTGFP29279 MIR3117-201ENST00000584034 78 ntBASIC2.46□□□□□ -2.02
CTGFP29279 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.46□□□□□ -2.02
CTGFP29279 MIR1248-201ENST00000629190 106 ntBASIC2.46□□□□□ -2.02
CTGFP29279 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CTGFP29279 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CTGFP29279 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTGFP29279 Y_RNA.229-201ENST00000364347 113 ntBASIC2.45□□□□□ -2.02
CTGFP29279 Y_RNA.243-201ENST00000364481 109 ntBASIC2.45□□□□□ -2.02
CTGFP29279 Y_RNA.280-201ENST00000364765 112 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-294P-201ENST00000364999 102 ntBASIC2.45□□□□□ -2.02
CTGFP29279 MIR488-201ENST00000365739 83 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-32P-201ENST00000383948 107 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-13P-201ENST00000384248 107 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-12P-201ENST00000384604 107 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-41P-201ENST00000384741 107 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-1228P-201ENST00000391014 107 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RNU6-1248P-201ENST00000391096 64 ntBASIC2.45□□□□□ -2.02
CTGFP29279 AL606845.1-201ENST00000404881 255 ntBASIC2.45□□□□□ -2.02
CTGFP29279 MLLT10P1-201ENST00000418346 262 ntBASIC2.45□□□□□ -2.02
CTGFP29279 RN7SKP179-201ENST00000516126 217 ntBASIC2.45□□□□□ -2.02
CTGFP29279 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.45□□□□□ -2.02
CTGFP29279 AC120024.3-201ENST00000603167 156 ntBASIC2.45□□□□□ -2.02
CTGFP29279 AL355297.2-201ENST00000604792 129 ntBASIC2.45□□□□□ -2.02
CTGFP29279 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTGFP29279 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.45□□□□□ -2.02
CTGFP29279 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CTGFP29279 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CTGFP29279 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
CTGFP29279 U8.9-201ENST00000365667 134 ntBASIC2.44□□□□□ -2.02
CTGFP29279 RNU6-975P-201ENST00000384296 105 ntBASIC2.44□□□□□ -2.02
CTGFP29279 RNU6-106P-201ENST00000384405 107 ntBASIC2.44□□□□□ -2.02
CTGFP29279 MIR627-201ENST00000384979 97 ntBASIC2.44□□□□□ -2.02
CTGFP29279 SNORA12.1-201ENST00000390873 148 ntBASIC2.44□□□□□ -2.02
CTGFP29279 AL031003.1-201ENST00000404229 172 ntBASIC2.44□□□□□ -2.02
CTGFP29279 RNU6-554P-201ENST00000410466 106 ntBASIC2.44□□□□□ -2.02
CTGFP29279 Y_RNA.622-201ENST00000411091 108 ntBASIC2.44□□□□□ -2.02
CTGFP29279 HMGN2P32-201ENST00000444648 269 ntBASIC2.44□□□□□ -2.02
CTGFP29279 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.44□□□□□ -2.02
CTGFP29279 HSPE1P13-201ENST00000451143 297 ntBASIC2.44□□□□□ -2.02
CTGFP29279 RNU7-57P-201ENST00000459540 60 ntBASIC2.44□□□□□ -2.02
CTGFP29279 RNA5SP490-201ENST00000517141 136 ntBASIC2.44□□□□□ -2.02
CTGFP29279 RNU2-60P-201ENST00000517290 128 ntBASIC2.44□□□□□ -2.02
CTGFP29279 AC007536.1-201ENST00000533382 349 ntBASIC2.44□□□□□ -2.02
CTGFP29279 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
CTGFP29279 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.44□□□□□ -2.02
CTGFP29279 U6.115-201ENST00000636045 103 ntBASIC2.44□□□□□ -2.02
CTGFP29279 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.44□□□□□ -2.02
CTGFP29279 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CTGFP29279 AC009487.4-201ENST00000624969 3585 ntBASIC2.44□□□□□ -2.02
CTGFP29279 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
CTGFP29279 Y_RNA.114-201ENST00000363265 113 ntBASIC2.43□□□□□ -2.02
CTGFP29279 RNU6-103P-201ENST00000363686 107 ntBASIC2.43□□□□□ -2.02
CTGFP29279 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
CTGFP29279 RNU6-438P-201ENST00000365561 103 ntBASIC2.43□□□□□ -2.02
CTGFP29279 SNORA72.4-201ENST00000384174 132 ntBASIC2.43□□□□□ -2.02
CTGFP29279 Y_RNA.521-201ENST00000384560 114 ntBASIC2.43□□□□□ -2.02
CTGFP29279 SNORA8.3-201ENST00000384679 139 ntBASIC2.43□□□□□ -2.02
CTGFP29279 RNY1P7-201ENST00000384743 110 ntBASIC2.43□□□□□ -2.02
CTGFP29279 AC133485.4-201ENST00000561835 220 ntBASIC2.43□□□□□ -2.02
CTGFP29279 AC138907.4-201ENST00000570107 226 ntBASIC2.43□□□□□ -2.02
CTGFP29279 MIR3121-201ENST00000579680 77 ntBASIC2.43□□□□□ -2.02
CTGFP29279 AL670379.3-201ENST00000605040 251 ntBASIC2.43□□□□□ -2.02
CTGFP29279 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.43□□□□□ -2.02
CTGFP29279 SNORD58C-201ENST00000365223 64 ntBASIC2.42□□□□□ -2.02
CTGFP29279 Y_RNA.361-201ENST00000365515 120 ntBASIC2.42□□□□□ -2.02
CTGFP29279 Y_RNA.393-201ENST00000383936 102 ntBASIC2.42□□□□□ -2.02
CTGFP29279 MIR561-201ENST00000385216 97 ntBASIC2.42□□□□□ -2.02
CTGFP29279 MIR616-201ENST00000385293 97 ntBASIC2.42□□□□□ -2.02
CTGFP29279 AL445687.1-201ENST00000439946 251 ntBASIC2.42□□□□□ -2.02
CTGFP29279 AL158147.1-201ENST00000443970 75 ntBASIC2.42□□□□□ -2.02
CTGFP29279 AL031737.1-201ENST00000450125 223 ntBASIC2.42□□□□□ -2.02
CTGFP29279 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
CTGFP29279 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.42□□□□□ -2.02
CTGFP29279 RNU7-141P-201ENST00000459304 62 ntBASIC2.42□□□□□ -2.02
CTGFP29279 RNU6-221P-201ENST00000459541 99 ntBASIC2.42□□□□□ -2.02
CTGFP29279 RPS29P24-201ENST00000486345 171 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms