Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR8054-201ENST00000620877 86 ntBASIC2.96□□□□□ -1.94
ERCC3P19447 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ERCC3P19447 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
ERCC3P19447 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.96□□□□□ -1.94
ERCC3P19447 Y_RNA.796-201ENST00000364268 102 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 Y_RNA.799-201ENST00000364992 102 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 Y_RNA.412-201ENST00000384001 104 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 RNU6-886P-201ENST00000384319 105 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 Y_RNA.555-201ENST00000384673 110 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 MIR802-201ENST00000390235 94 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 RNU6-578P-201ENST00000390980 103 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.95□□□□□ -1.94
ERCC3P19447 RNU7-34P-201ENST00000459394 64 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.95□□□□□ -1.94
ERCC3P19447 AL391903.3-201ENST00000612158 163 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 AL591926.4-201ENST00000616895 298 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 U4.3-201ENST00000621047 82 ntBASIC2.95□□□□□ -1.94
ERCC3P19447 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ERCC3P19447 RNU6-728P-201ENST00000365375 104 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 DEFA7P-201ENST00000382676 285 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 Y_RNA.435-201ENST00000384095 112 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 RNA5SP210-201ENST00000391034 120 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 RNU6-131P-201ENST00000391144 107 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.94□□□□□ -1.94
ERCC3P19447 AC055731.1-201ENST00000474387 401 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.94□□□□□ -1.94
ERCC3P19447 RPL23AP63-201ENST00000498752 471 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 AL358944.1-201ENST00000528537 144 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 AC108706.1-201ENST00000611053 297 ntBASIC2.94□□□□□ -1.94
ERCC3P19447 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
ERCC3P19447 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ERCC3P19447 ZNF702P-202ENST00000434269 1966 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 RNU6-1084P-201ENST00000362498 107 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 U8.2-201ENST00000363156 134 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 SNORA4.2-201ENST00000365313 147 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 Y_RNA.357-201ENST00000365487 109 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 RNU6-1228P-201ENST00000391014 107 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 RN7SKP200-201ENST00000410564 320 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 RPS27P1-201ENST00000450552 247 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 SUB1P4-201ENST00000566062 339 ntBASIC2.93□□□□□ -1.94
ERCC3P19447 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
ERCC3P19447 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
ERCC3P19447 MIR6073-201ENST00000352083 89 ntBASIC2.92□□□□□ -1.94
ERCC3P19447 MIR144-201ENST00000384886 86 ntBASIC2.92□□□□□ -1.94
ERCC3P19447 MTND2P29-201ENST00000438595 412 ntBASIC2.92□□□□□ -1.94
ERCC3P19447 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.92□□□□□ -1.94
ERCC3P19447 AC109810.1-201ENST00000534066 224 ntBASIC2.92□□□□□ -1.94
ERCC3P19447 AC104465.1-201ENST00000611365 139 ntBASIC2.92□□□□□ -1.94
ERCC3P19447 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
ERCC3P19447 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ERCC3P19447 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ERCC3P19447 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ERCC3P19447 Y_RNA.8-201ENST00000362353 102 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 RNU6-112P-201ENST00000363599 104 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 RNU6-275P-201ENST00000364910 107 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 RNU6-950P-201ENST00000384651 107 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 MIR15B-201ENST00000385045 98 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ERCC3P19447 SNORA79-201ENST00000408376 140 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 RNU4-53P-201ENST00000410828 140 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 RN7SKP101-201ENST00000411376 320 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 Z98742.3-201ENST00000418637 326 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.91□□□□□ -1.94
ERCC3P19447 HSPE1P9-201ENST00000440046 311 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 SNORA31.11-201ENST00000516528 139 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 MRPS18CP4-201ENST00000535821 231 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 MIR4287-201ENST00000579398 78 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 SNORA28-201ENST00000606769 126 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 uc_338.4-201ENST00000616635 176 ntBASIC2.91□□□□□ -1.94
ERCC3P19447 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ERCC3P19447 Y_RNA.75-201ENST00000362927 97 ntBASIC2.9□□□□□ -1.95
ERCC3P19447 Y_RNA.240-201ENST00000364469 95 ntBASIC2.9□□□□□ -1.95
ERCC3P19447 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
ERCC3P19447 RNA5SP482-201ENST00000391269 118 ntBASIC2.9□□□□□ -1.95
ERCC3P19447 SEPT7P4-201ENST00000437076 306 ntBASIC2.9□□□□□ -1.95
ERCC3P19447 RNU6-561P-201ENST00000516222 102 ntBASIC2.9□□□□□ -1.95
ERCC3P19447 RNA5SP437-201ENST00000517249 129 ntBASIC2.9□□□□□ -1.95
ERCC3P19447 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
ERCC3P19447 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ERCC3P19447 SNORA63D-201ENST00000364359 132 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 SNORD114-30-201ENST00000364448 72 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ERCC3P19447 AL034345.1-201ENST00000407768 123 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 MIR548I3-201ENST00000408378 149 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 MIR548I1-201ENST00000408810 149 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 AL158823.1-201ENST00000418441 478 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 RNU7-28P-201ENST00000516759 62 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 RNA5SP402-201ENST00000517148 110 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 IGLV3-17-201ENST00000519099 244 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 AC121758.2-201ENST00000553271 193 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 Pinc.1-201ENST00000616452 154 ntBASIC2.89□□□□□ -1.95
ERCC3P19447 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.88□□□□□ -1.95
ERCC3P19447 RNU6-312P-201ENST00000364629 107 ntBASIC2.88□□□□□ -1.95
ERCC3P19447 AC006461.1-201ENST00000412637 326 ntBASIC2.88□□□□□ -1.95
ERCC3P19447 SNORD11-201ENST00000459124 84 ntBASIC2.88□□□□□ -1.95
ERCC3P19447 SNORA31.10-201ENST00000516482 106 ntBASIC2.88□□□□□ -1.95
ERCC3P19447 MIR4709-201ENST00000577272 72 ntBASIC2.88□□□□□ -1.95
ERCC3P19447 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.88□□□□□ -1.95
ERCC3P19447 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ERCC3P19447 RNY3P5-201ENST00000384127 102 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms