Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL773524.1-201ENST00000614065 229 ntBASIC2.52□□□□□ -2.01
ATF4P18848 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ATF4P18848 SNORA38.1-201ENST00000364172 131 ntBASIC2.51□□□□□ -2.01
ATF4P18848 SNORA16B-201ENST00000364674 135 ntBASIC2.51□□□□□ -2.01
ATF4P18848 RNU6-424P-201ENST00000384367 105 ntBASIC2.51□□□□□ -2.01
ATF4P18848 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.51□□□□□ -2.01
ATF4P18848 AC114811.1-201ENST00000507207 168 ntBASIC2.51□□□□□ -2.01
ATF4P18848 RNU7-12P-201ENST00000516030 62 ntBASIC2.51□□□□□ -2.01
ATF4P18848 RNA5SP168-201ENST00000516642 112 ntBASIC2.51□□□□□ -2.01
ATF4P18848 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.51□□□□□ -2.01
ATF4P18848 MIR4276-201ENST00000584832 70 ntBASIC2.51□□□□□ -2.01
ATF4P18848 AC097639.2-201ENST00000603159 172 ntBASIC2.51□□□□□ -2.01
ATF4P18848 AL365434.2-201ENST00000607979 234 ntBASIC2.51□□□□□ -2.01
ATF4P18848 AL513423.1-201ENST00000621695 132 ntBASIC2.51□□□□□ -2.01
ATF4P18848 AC091953.5-201ENST00000622919 233 ntBASIC2.51□□□□□ -2.01
ATF4P18848 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ATF4P18848 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATF4P18848 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ATF4P18848 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.51□□□□□ -2.01
ATF4P18848 Y_RNA.170-201ENST00000363746 110 ntBASIC2.5□□□□□ -2.01
ATF4P18848 RNU6-746P-201ENST00000384112 109 ntBASIC2.5□□□□□ -2.01
ATF4P18848 SNORD17-201ENST00000390930 237 ntBASIC2.5□□□□□ -2.01
ATF4P18848 SNORD37.2-201ENST00000391075 66 ntBASIC2.5□□□□□ -2.01
ATF4P18848 MIR891A-201ENST00000401237 79 ntBASIC2.5□□□□□ -2.01
ATF4P18848 CALM2P4-201ENST00000430810 426 ntBASIC2.5□□□□□ -2.01
ATF4P18848 SUMO1P3-201ENST00000439961 304 ntBASIC2.5□□□□□ -2.01
ATF4P18848 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.5□□□□□ -2.01
ATF4P18848 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.5□□□□□ -2.01
ATF4P18848 SCARNA13-201ENST00000516672 275 ntBASIC2.5□□□□□ -2.01
ATF4P18848 MIR3651-201ENST00000630427 90 ntBASIC2.5□□□□□ -2.01
ATF4P18848 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATF4P18848 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
ATF4P18848 Y_RNA.91-201ENST00000363042 107 ntBASIC2.49□□□□□ -2.01
ATF4P18848 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ATF4P18848 U8.16-201ENST00000391279 133 ntBASIC2.49□□□□□ -2.01
ATF4P18848 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.49□□□□□ -2.01
ATF4P18848 RNU4-47P-201ENST00000410876 114 ntBASIC2.49□□□□□ -2.01
ATF4P18848 AC244636.1-201ENST00000421152 228 ntBASIC2.49□□□□□ -2.01
ATF4P18848 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
ATF4P18848 IGKV2-26-201ENST00000518305 343 ntBASIC2.49□□□□□ -2.01
ATF4P18848 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
ATF4P18848 AC021506.2-201ENST00000612354 169 ntBASIC2.49□□□□□ -2.01
ATF4P18848 MIR6844-201ENST00000637122 62 ntBASIC2.49□□□□□ -2.01
ATF4P18848 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ATF4P18848 MIRLET7C-201ENST00000362160 84 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RNU6-199P-201ENST00000362954 107 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RNU6-833P-201ENST00000363486 107 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RNU6-151P-201ENST00000364158 107 ntBASIC2.48□□□□□ -2.01
ATF4P18848 SNORA25.7-201ENST00000364375 127 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RNU6-1130P-201ENST00000365434 107 ntBASIC2.48□□□□□ -2.01
ATF4P18848 Y_RNA.393-201ENST00000383936 102 ntBASIC2.48□□□□□ -2.01
ATF4P18848 MIR490-201ENST00000384865 128 ntBASIC2.48□□□□□ -2.01
ATF4P18848 MIR634-201ENST00000385208 97 ntBASIC2.48□□□□□ -2.01
ATF4P18848 NDUFB4P4-201ENST00000404822 243 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RNA5SP274-201ENST00000410484 108 ntBASIC2.48□□□□□ -2.01
ATF4P18848 AC006028.1-201ENST00000438379 402 ntBASIC2.48□□□□□ -2.01
ATF4P18848 PGBD4P5-201ENST00000445958 426 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RN7SL633P-201ENST00000488974 297 ntBASIC2.48□□□□□ -2.01
ATF4P18848 RNU7-200P-201ENST00000516105 62 ntBASIC2.48□□□□□ -2.01
ATF4P18848 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
ATF4P18848 Y_RNA.703-201ENST00000516846 111 ntBASIC2.48□□□□□ -2.01
ATF4P18848 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.48□□□□□ -2.01
ATF4P18848 MIR3646-201ENST00000578301 84 ntBASIC2.48□□□□□ -2.01
ATF4P18848 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.48□□□□□ -2.01
ATF4P18848 Y_RNA.778-201ENST00000620203 90 ntBASIC2.48□□□□□ -2.01
ATF4P18848 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.48□□□□□ -2.01
ATF4P18848 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATF4P18848 RNU6-414P-201ENST00000363705 104 ntBASIC2.47□□□□□ -2.01
ATF4P18848 RNY1P5-201ENST00000383890 115 ntBASIC2.47□□□□□ -2.01
ATF4P18848 SNORD38C-201ENST00000384381 69 ntBASIC2.47□□□□□ -2.01
ATF4P18848 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
ATF4P18848 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.47□□□□□ -2.01
ATF4P18848 RPS29P6-201ENST00000438196 145 ntBASIC2.47□□□□□ -2.01
ATF4P18848 SNRPGP13-201ENST00000442212 177 ntBASIC2.47□□□□□ -2.01
ATF4P18848 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.47□□□□□ -2.01
ATF4P18848 RN7SKP57-201ENST00000517248 293 ntBASIC2.47□□□□□ -2.01
ATF4P18848 RNU6-1116P-201ENST00000517269 99 ntBASIC2.47□□□□□ -2.01
ATF4P18848 MIR5004-201ENST00000579078 107 ntBASIC2.47□□□□□ -2.01
ATF4P18848 AC006441.5-201ENST00000612680 209 ntBASIC2.47□□□□□ -2.01
ATF4P18848 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATF4P18848 RNU6-597P-201ENST00000365620 102 ntBASIC2.46□□□□□ -2.02
ATF4P18848 SNORD24-201ENST00000383884 75 ntBASIC2.46□□□□□ -2.02
ATF4P18848 Y_RNA.400-201ENST00000383963 111 ntBASIC2.46□□□□□ -2.02
ATF4P18848 Y_RNA.506-201ENST00000384494 102 ntBASIC2.46□□□□□ -2.02
ATF4P18848 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
ATF4P18848 Z92545.1-201ENST00000411782 234 ntBASIC2.46□□□□□ -2.02
ATF4P18848 MTND5P41-201ENST00000517498 206 ntBASIC2.46□□□□□ -2.02
ATF4P18848 MIR8057-201ENST00000620957 69 ntBASIC2.46□□□□□ -2.02
ATF4P18848 SNORD3E-202ENST00000627253 216 ntBASIC2.46□□□□□ -2.02
ATF4P18848 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
ATF4P18848 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.46□□□□□ -2.02
ATF4P18848 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ATF4P18848 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ATF4P18848 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATF4P18848 RNU6-768P-201ENST00000384683 107 ntBASIC2.45□□□□□ -2.02
ATF4P18848 RNA5SP229-201ENST00000410809 99 ntBASIC2.45□□□□□ -2.02
ATF4P18848 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.45□□□□□ -2.02
ATF4P18848 RNU6-693P-201ENST00000516134 107 ntBASIC2.45□□□□□ -2.02
ATF4P18848 Y_RNA.666-201ENST00000516187 112 ntBASIC2.45□□□□□ -2.02
ATF4P18848 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms